Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g1534 ATGGAACAATTTGGAAGCATTACTCACTTTCTTAAGGATAAGAATGTTTTGGTCCTCGGTGCCACCGGCTTCCTTGCAAAAATATTTATAGAGAAGATATTGCGCGTTCAACCAAATGTGAAAAAACTTTATCTTCTTTTAAGAGCTTCAGATGTTGAATCTGCCACCAGAAGAATGCAAAATGAGATTTTACGAAAGGACTTGTTCAGATTGTTGAAGGAAAATCTTGGTGCAAAGTTCAATAGCTTTATCACAGAAAAATTGACTCTAGTGCCTGGGGATATTTCCCAAGAAGACTTCAATTTGAAGGATTCAAATCTACTTAAAGAGTTAAAAGATCAAACTAATGTCATTGTGAATTTAGCTGCAACAACAAACTTTGATGAAAGATATGATGTTGCATTGGGTTTAAATACATTTGGAGTTAAGCATGTTTTAAACTTCGCCAAAAATTGTATTAACCTGAGGGTGCTTGTCCATGTATCCACAGCATACGTATGTGGGGAGAGAGGAGGACTCATAGTAGAAGATCCATACCAATTGGGTGCATCACTAAATGGAGTGGCAGGACTAGACATTGATGTGGAAAAGAAAATTGTTGAAGAGAAATTGAACATGCTTCGACAAGAGGGAGCTACTGAAAAAGATATTAAAGTTAGCATGAAGGATTTGGGTATGAAAAGAGCGAATTTGTATGGATGGCCAAACACATACGTCTTTACTAAGGCAATGGGTGAAATGCTTGTGGGGACTATGAAGGAAAAGATGTCAATTGTGATTGTGCGTCCTACAATCATTACCAGCACTTACAAAGAACCTTTCCCTGGGTGGGTCGAAGGAGTAAGAACCATAGACAGTTTAATTGTTGCTTATGGTAAAGGAAAATTAACATGCTTCCTTGCAGACCTTGAGGCAGTATTTGATGTGATTCCTGCTGACATGGTGGTGAATGCAATGTTGGTGGCTATGGCGAGTCATGCAAATCAACCTTGTGATAGCATATATCATGTGGGTTCTTCTGTTGGGAATCCAGTTAGATATCTGAATCTCAGAGATTTTAGCTTCAGATATTTTACTGCAAAACCATGTTTAGACAAAGAAGGAAAAGCCATCAAAGTTGGCAAAGTTACTGTATTGGAAAATATGAATAGCTTCCAAAGATATATGTACATTCGTTACTTGCTTCCATTACAGGGGCTAAAGCTAGTGAATGAAGCTTTCTGTCACTATTTTCAGGGCATGTATTTCGATATCCATAGGAGAGTCCATACTGTGATGCGCTTGGTTGACCTTTACCGACCCTATTGTTTCTTTGCTGGCGTATTTGATAATATGAATGCAGAGAAGTTGCAAATAGCAGCAAAACAAAGTGGAGTAGAGATGGATTTGTTTTACTTTGATCCAAAAATGATTGACTGGGAAGACTACTTCATGAATATCCACATTCCCGGCATTGTCAAATATTCCTTCAAGTGA 1476 0.3801 MEQFGSITHFLKDKNVLVLGATGFLAKIFIEKILRVQPNVKKLYLLLRASDVESATRRMQNEILRKDLFRLLKENLGAKFNSFITEKLTLVPGDISQEDFNLKDSNLLKELKDQTNVIVNLAATTNFDERYDVALGLNTFGVKHVLNFAKNCINLRVLVHVSTAYVCGERGGLIVEDPYQLGASLNGVAGLDIDVEKKIVEEKLNMLRQEGATEKDIKVSMKDLGMKRANLYGWPNTYVFTKAMGEMLVGTMKEKMSIVIVRPTIITSTYKEPFPGWVEGVRTIDSLIVAYGKGKLTCFLADLEAVFDVIPADMVVNAMLVAMASHANQPCDSIYHVGSSVGNPVRYLNLRDFSFRYFTAKPCLDKEGKAIKVGKVTVLENMNSFQRYMYIRYLLPLQGLKLVNEAFCHYFQGMYFDIHRRVHTVMRLVDLYRPYCFFAGVFDNMNAEKLQIAAKQSGVEMDLFYFDPKMIDWEDYFMNIHIPGIVKYSFK* 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g1534 491 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 7 339 IPR036291 -
Tpr4g1534 491 CDD FAR_C 391 488 IPR033640 -
Tpr4g1534 491 Gene3D - 8 381 - -
Tpr4g1534 491 CDD FAR-N_SDR_e 14 362 - -
Tpr4g1534 491 PANTHER MALE STERILITY PROTEIN 2-RELATED 3 490 IPR026055 GO:0080019
Tpr4g1534 491 Pfam Male sterility protein 20 319 IPR013120 -
Tpr4g1534 491 Pfam Male sterility protein 392 491 IPR033640 -
Tpr4g1534 491 PANTHER FATTY ACYL-COA REDUCTASE 3 490 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g1534 Tpr-Chr4 15097079 15103872 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g1534 114 490 Acyl Lipid Metabolism Gene Families AT4G33790 59.416 5.52e-176 497
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g1534 K13356 - gmx:100788994 778.474
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g3837 7 47643396 47651315 Tpr4g1534 4 15097079 15103872 PCT