Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g1527 ATGGATCGAGTGAACCTTGACGGAAAACCAATCCAGCCGATATCAATATGCATGATCGGCGGTGGAGGTTTCATCGGATCACATCTCTGCGAAAAGCTAATGTCCGAAACATCTCACAAAGCTATCGTCGTCGATGTCTCCTCCGACAAAATCAAAAATCTCCTTGATAAGTCTCTTCCTTGGGCCAACCGTATCGAATTTCATCAAATGAACATCAAGAACGATTCTCGCCTTGAAACTCTTGTCAAAGCTGCTGATCTCACGATTAATCTTGCTGCGATTTGTACTCCGGCGGATTATAATACGCGGCCATTGGATACGATTTTCAGTAATTTCGTTGATGCGATTCCGGTGATTAAATTTTGCACTGAGAACAAAAAGCGTTTGATTCATTTTTCTACCTGTGAGGTATTTGGGAAGACTATAGGTAGCTTTCTGCCTGAAGAATATAGAAAGGACCCCAAATATTACATGCTCACAGAAGATGTGACTCCTTGTATATTTGGTCCTGTTGAGAAGCAAAGGTGGTCTTATGCTTGTGCAAAGCAAATGACAGACAGGCTAATTTATGCTGAGTATGCTGAGAATGGCCTCAAGTTCACTATTGTGAGACCTTATAACTGGATTGGACCAAGAATGGACTTCATTCCTGGTGTGGATGGCCCAAGTGATGGTGTCCCCAGAGTTTTAGCTTGTTTCAGTAATAATCTTCTGCGTGGCGAGCCGCTCAAACTTGTTGACGGTGGACAATCAAAGAGAACCGTTCTCTATATCAAAGATGCAATTGAAGCTGTTTTGTTAATGATTGATAACCCTGATAGAGCAAATGGACACATCTTTAATGTGGGAAACCCAGATAATGAAGTATCTGTTAAGGAACTAGCTGAGCTTATGATAAAGGTATATGCAAAGGTGGCTGATATACCTGCTTCTAGTCTATCAACTCTGAATGTGCGTTCGGAGGATTTCTATGGTAAAGGCTATGATGACAGTGATAGGCGCATTCCTGACATGACGATTATCACCAGACAACTTGGTTGGAAGCCAAAGACATCTCTTGATGACCTGTTGGATTCAACCCTTCGATATCAACATCAGACATATTCTCATGCTATCAAAAAAGAACTCTCAAAAGCTTCAACTTGA 1146 0.4162 MDRVNLDGKPIQPISICMIGGGGFIGSHLCEKLMSETSHKAIVVDVSSDKIKNLLDKSLPWANRIEFHQMNIKNDSRLETLVKAADLTINLAAICTPADYNTRPLDTIFSNFVDAIPVIKFCTENKKRLIHFSTCEVFGKTIGSFLPEEYRKDPKYYMLTEDVTPCIFGPVEKQRWSYACAKQMTDRLIYAEYAENGLKFTIVRPYNWIGPRMDFIPGVDGPSDGVPRVLACFSNNLLRGEPLKLVDGGQSKRTVLYIKDAIEAVLLMIDNPDRANGHIFNVGNPDNEVSVKELAELMIKVYAKVADIPASSLSTLNVRSEDFYGKGYDDSDRRIPDMTIITRQLGWKPKTSLDDLLDSTLRYQHQTYSHAIKKELSKAST* 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g1527 381 Pfam NAD dependent epimerase/dehydratase family 16 283 IPR001509 -
Tpr4g1527 381 PANTHER BIFUNCTIONAL POLYMYXIN RESISTANCE PROTEIN ARNA 1 381 - -
Tpr4g1527 381 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 16 366 IPR036291 -
Tpr4g1527 381 Gene3D - 15 374 - -
Tpr4g1527 381 PANTHER UDP-GLUCURONATE DECARBOXYLASE-RELATED 1 381 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g1527 Tpr-Chr4 15004199 15007517 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g1527 K12449 - gmx:100790039 667.537
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g1527 4 15004199 15007517 Tpr4g1527 4 15004199 15007517 ECH