Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g1517 ATGTTGAGTTCTGGGAGTAACTTAAACAGCAGCAGCGCAAGTGGGATAACTTCATCGGATATGCCACCTTTGCCCCAGTGTTTGCCGCTAGATTCAATAACAGTAGGAAACCAAAAATTTACGGGGGAGCTAAAGAGGGTACTATGTGTTTCTGCTGGAAACACTTCAGAAGACCATTCTTTTGGAGTTCCTCATCCTAAATCAATGGGCCCAGGGTCCTCAGGAGAGTTAAAACACTTAAAAGAAAGTGTTCAAGATGCATCCAGAAAGGCTAGGGATAGATCAAAAATGTTTCGTGAATCTATATCTAAACTGGATAGGTATAGAGAGGCCTTAAACTCAAAGAAGAGGCAAAGGAGCGATTTATCAAGTGAAAAGGGAAGTGGAGTAAACTTAACAAAGATGGGTAGCCAGATTCACAAAATCCCGAATGATAATATGACTCAGAGAGAAGTCAAAACCTCAAATTCAATGCTGAATAAGCGAATTCGTATGTCAGTGGGAGACACACGGGAGGAAAGTAGGTCTGCTGCTATTGGAAGACAACCAATGCTCACTGAGAAGGATGGAAATCTGATTCAGACACTTGGGGGGGACTCTGTTCGAAATGAAGAGAAAACTCGCAGATTACTTGCCGGAGGCGAGGGATTAGATCAAAAAATAAAAAAGAAGAGGTCCGTCGGAACAGTAGGAAACAGAGTTATATCTGGTGAAAGGGACGCAAAACGAGTTACTTTTCCAAAGGGAAATGCTGATTTGAAGATGCGATTTAATGATGCTCAGGGTTTCGGATTGAAACCACTTCCTGGATCTAGTGGAATCAACAAGTCTGAGAGCTCTTCAGAGCCTAATAATACAGGTGTGCGTGTGATGCTTACAGGTGAGCAAGGTGTTTCTCTTCACAGGGACCACACAGCTGACCAGAGAGTTGTAGCAAAAGGAAACAACAGAGCAAACACTCAGGAGGACCCAACAGGCAGCCCGAATGCACCAATTAAAAACAAGGTATCTCGGACACCAAGAACGGGTTCAGTTAGTGCGCTAGAGTTGCCTAACAGTCAGTCTCCTTCTGGAAGTTTTCCAGGTTCTTCTATACATCCAATGACCCAGTGGGGTGGACAGAGACCACCTAAAAATTCACGCTCACGAAGAGTGAAAGTAGTTCCTCCCGCCTCACGCAACCTTGAAGTTCAGGTCTCATCTGAAGGCTGTCTGACTTCTGATTTCAATGTTAAAGTTTCTTCTGTTGGCAACAATGGGTTCCAACTGGCTAGCAGTGCAGATAACAGTACACCGAAATATAAACGACAGCCTGATGATATTTCGTCTCCCTTTGGATTATCTGAAAGTGAAGAATCTGTTGCTGGGGAAAACAAAATAAAAGAGAAAGGTGTGAATGGAAGTGACACTGCTATGGTTGCAGATAAGGATGGAACTCCTATGTTACAAATGAGGAAGAATAAAATACCAACAGATGAATTAGGAGATGGTGTGCAGAGACACGGAAGAACTGGAAGGAATTTATTGTCAATAAGACCAGGCCTTCCATTGGGGAGGGAGAAGTCTGAGAATGTACCTATACTGAAGCCGCCAGTACAAGACATGAGGCCTAATGATAAGAATAAAACCAAAAATGGGCGCCCTCCTTCAAAAAAGCAGAAAGAACGCAAGGTTTTGACTCGTGTAGGGAAGCAACTGAACATTGGTTCTTCTGATTTTGGAGGTGAATCTGATGATGATCGCGAAGAATTATGTAAAGCTGCTAATGCTGCTCTTAATGCTAGCAATCTTGCTTCGGGTCCATTTTGGAGTAAAATGGAGCATATTTTTGCTTCCATCAGCTTGGATGATGCATCTTTCGTGAAGCAACAGCTCAATATTGCTGACAATTTGGAAAAGAGTTTATCTCATATGTTTGCCATTGATCATGATATGTTGGGTGTTGTTGTAAATAACAAAACAACTCAAGGTTCAGAGGATAGAAGGAGAAGCCACTTTGATGAAGAATCAGCCAAGTTTGAGGCTGTAGGTGGGAGGAGTGACATAGAAAGACTGGACAAGGGTACCCCATTATTCCAAAGACTTCTCTGTGCTCTAATTGATGAAGACGACAATGAAGAATCATACCACCAAAGCGAAGCAAAGAATATATCTAGACAGTGTGCTAGTGATGATTCTCACTGTGGTTCTTGTAATCAAGTTGATTTTGAACCCAAAGACCGGGATAGAATGGAATCTGAAGTTGAATCGCAGGTGGATTTTCAAATTCAGAAGAATTGTAAATTGGACAGACTATCTTGTGATAAGAGTACCACATCCAACACATTTAGGTACCCCAACACACCCAGTTCTTCACAAAGCACAGGAGTTTGGCAGGGAGATGAAGAATTTTGCCTTTCTGACATCACTCACACCAGTGAAATATGTTCAAATGATCTTGATCAACTGCACCCTGAATTAAGTAATCCTAGCTTTGCTTCTCCTGATGGTGAGTATCAGCTGATGTCTTTGGATGACAGGCTGCTGCTTGAGTTGCAGAGCATTGGTATATATCCAGAAATATTGCCTGATTTAGCTGAGGAAGATGAAGCTATAATTCATGACATTGTGAAACTTGAGAAAACTCTATATGAACAGAATGGAAGGAAGAAGAGCAACTTGGACATAATTGATAGAGCTATTCTAGAAGGGAGGGACATTGAAAAACGGAAGATTGAGCAAACTGCATTCGACCAACTTACTGAAATGGCTTACAGAAAGAGATTGGCATGCCGTGGAAGTAGAAATTCAAAAAGTGTCGTTCAGAAGGTTTCAAATCAAGTTGCTCTGGCTTTTCTTAAACGTACCCTTGGAAGATGTAGAAGATATGAAGAAGTTGGTGTTAGCTGCTTTAGTGAACCTACTCTGCAAAATATTATGTTTTCCCCTCATTCACGTGAGAATGGTGGACAGCTTGCAGATTGCATTTACTCTGGCACAGCCAGTAATACATGCAATAAAGCTTTGCATCAAATTGAAACCAGAAAATTAGGTGCAGTTTCGAGTGCTTCTGAGAAATATGATGGTCAGAGGGATTATGCAGACAGGGGACTGGTTGATTCTTTTCAAGGTTCGATCCACTCATCAGAACAAATGTCATCTAAGAATGGGTCTGTGATGATGAAGGAGAAGAAGAGGGAAATGCTGGTCAATGGCTCTTCAAGAACATCAAATCTTGATGGCGCTGTTCCCGGTGGAGTGAGGGGAAAGAGAAGTGAGAGGGAAAGAAATCAGATGCGGGATCAGGCCAGACAAAATTCTAATTCCATAGCTGGTTGCCCGTCATTCGACAGTAGACAAAATGAAAACAAGCCAAAAGCTAAGGCCAAGCAAAAGAGTACTTCCGGTGGACAAGATAGGTTCATGGAAGCAAAGGAATCTGCATGTTTACCAATTTATGATTCTAGTCTATCTGTGGCTAATGCAAGCAACAATGGTAGAAAAGATAGGACAACATTATCTGTTAACCAGGACAATTCTCAAGTAAAGGAATCCTCGGACTTCGGGAATTTGCCGCTGCCTGATTTAAGTGCAATAGACGAATTTGGTGTATCTGGTGAACTTGGCGGGCCGCAAGATCTTGGTTCTTGGTTGAACTTTGATGATGATGGTTTGCAAGACACTGATTGTATTATGGGCCTTGAAATTCCAATGGATGACCTATCAGCGTTGGATATGCTTATGTGA 3726 0.4208 MLSSGSNLNSSSASGITSSDMPPLPQCLPLDSITVGNQKFTGELKRVLCVSAGNTSEDHSFGVPHPKSMGPGSSGELKHLKESVQDASRKARDRSKMFRESISKLDRYREALNSKKRQRSDLSSEKGSGVNLTKMGSQIHKIPNDNMTQREVKTSNSMLNKRIRMSVGDTREESRSAAIGRQPMLTEKDGNLIQTLGGDSVRNEEKTRRLLAGGEGLDQKIKKKRSVGTVGNRVISGERDAKRVTFPKGNADLKMRFNDAQGFGLKPLPGSSGINKSESSSEPNNTGVRVMLTGEQGVSLHRDHTADQRVVAKGNNRANTQEDPTGSPNAPIKNKVSRTPRTGSVSALELPNSQSPSGSFPGSSIHPMTQWGGQRPPKNSRSRRVKVVPPASRNLEVQVSSEGCLTSDFNVKVSSVGNNGFQLASSADNSTPKYKRQPDDISSPFGLSESEESVAGENKIKEKGVNGSDTAMVADKDGTPMLQMRKNKIPTDELGDGVQRHGRTGRNLLSIRPGLPLGREKSENVPILKPPVQDMRPNDKNKTKNGRPPSKKQKERKVLTRVGKQLNIGSSDFGGESDDDREELCKAANAALNASNLASGPFWSKMEHIFASISLDDASFVKQQLNIADNLEKSLSHMFAIDHDMLGVVVNNKTTQGSEDRRRSHFDEESAKFEAVGGRSDIERLDKGTPLFQRLLCALIDEDDNEESYHQSEAKNISRQCASDDSHCGSCNQVDFEPKDRDRMESEVESQVDFQIQKNCKLDRLSCDKSTTSNTFRYPNTPSSSQSTGVWQGDEEFCLSDITHTSEICSNDLDQLHPELSNPSFASPDGEYQLMSLDDRLLLELQSIGIYPEILPDLAEEDEAIIHDIVKLEKTLYEQNGRKKSNLDIIDRAILEGRDIEKRKIEQTAFDQLTEMAYRKRLACRGSRNSKSVVQKVSNQVALAFLKRTLGRCRRYEEVGVSCFSEPTLQNIMFSPHSRENGGQLADCIYSGTASNTCNKALHQIETRKLGAVSSASEKYDGQRDYADRGLVDSFQGSIHSSEQMSSKNGSVMMKEKKREMLVNGSSRTSNLDGAVPGGVRGKRSERERNQMRDQARQNSNSIAGCPSFDSRQNENKPKAKAKQKSTSGGQDRFMEAKESACLPIYDSSLSVANASNNGRKDRTTLSVNQDNSQVKESSDFGNLPLPDLSAIDEFGVSGELGGPQDLGSWLNFDDDGLQDTDCIMGLEIPMDDLSALDMLM* 1242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g1517 1241 MobiDBLite consensus disorder prediction 300 362 - -
Tpr4g1517 1241 MobiDBLite consensus disorder prediction 312 362 - -
Tpr4g1517 1241 PANTHER OS05G0107300 PROTEIN 1 1241 - -
Tpr4g1517 1241 MobiDBLite consensus disorder prediction 370 389 - -
Tpr4g1517 1241 MobiDBLite consensus disorder prediction 1061 1133 - -
Tpr4g1517 1241 MobiDBLite consensus disorder prediction 1 23 - -
Tpr4g1517 1241 MobiDBLite consensus disorder prediction 1080 1094 - -
Tpr4g1517 1241 MobiDBLite consensus disorder prediction 56 130 - -
Tpr4g1517 1241 MobiDBLite consensus disorder prediction 166 187 - -
Tpr4g1517 1241 PANTHER SPECTRIN BETA CHAIN, BRAIN 1 1241 - -
Tpr4g1517 1241 MobiDBLite consensus disorder prediction 1 21 - -
Tpr4g1517 1241 MobiDBLite consensus disorder prediction 535 558 - -
Tpr4g1517 1241 MobiDBLite consensus disorder prediction 512 558 - -
Tpr4g1517 1241 MobiDBLite consensus disorder prediction 79 123 - -
Tpr4g1517 1241 Coils Coil 105 125 - -
Tpr4g1517 1241 MobiDBLite consensus disorder prediction 1095 1113 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g1517 Tpr-Chr4 14924312 14933926 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g1517 - - mtr:MTR_4g053240 1960.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g1517 4 14924312 14933926 Tpr4g1517 4 14924312 14933926 ECH