Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g1515 ATGGAGAATCTTCCTGTTGAAGTCATTGGGAACATACTGTCCCATCTCAAGGCTGCAAGAGATGTAGTAATTGCCTCAGCAACATGCAAAAAATGGCGAATTGCGTGTTGCAAACATCTCCATACAATTTCATTCAGTTCGAATGATTGGTCTGTTTATCGCGATATGACAACGACCCGTCTCGAGATTTTGATCACACAGACAATTTTCCAGACTTCAGGGTTGCAGTCCCTTTCCATTTTGATGGAAGATGTTGATGAGTTTTCGGCTTCTGCTGTTATTGCTTGGCTTATGTATACAAGGGAAACTTTGAGGCAGTTGTTTTATAATGTGAAGACTATGCCGAATGTTAATATTCTCGAGATATGTGGTAGGCATAAGCTGGAAATACTTGATTTGGCTCATAATTCTATTGTTGGGGTTGAGCCTAATTATCAGAGGTTTCCGTGTTTGAAATCTCTTTCGTTGAGTTATGTTAGTATATCTGCGTTGGATTTGAATCTTTTGGTGTCTGCGTGTCCGAGGATTGAGGTTTTAGAGCTTGTTAATCCGGAGATTGCAATGTCTGATGCACAGGTGAGCGTTGAATTGAGTAGTTCGACGCTGAAGAGTGTTTATGTTGAAGCAATCAGTTTGGATAAGTTTATATTGGAGGCTGATGGGATTGAGTGTCTGCATTTGAAAGATTGTGCGCTTGAGGATTTTGAACTAATTGGTAAGGGGACTTTGAAGAATTTCAGGATTGACGATGTTAGTGTTATACATCTTGATATCGGTGAGATTGTTGAGAATCTTGAGACTGTGGATATCAGCAACTTCACAATTATCTGGCCAAAATTTTACCAGATGATTTCGAGATCGTCGAATTTGAAGAGGCTTAGGCTTTGGGATGTGATGTTTGATGATGAGGATGAGGTTGTGGATTTGGAAACTATTGCTACTTGCTTTCCACACCTGACTCATTTATCGCTGAGTTATGATGTGAGAGATGGAGTTCTTCACTATAGTTTACAAGGATCTTCTTATCTAGAGAATGTTGTTGTTTTGGAGCTTGGGTGGAATGTGATTAATGATCTTTTCTCCCAGTGGGTTGAGGGGCTGCTTAAGCGATGTCCTATTCTCAAGAAACTTGTCATTTACGGTGTTGTTTCCGAGGCAAAGTCTGATGAAGAATGCAAGATGTTGGCCAATTTCACTACATCCATGGTTGAGCTGATGAGGAGATACACAGATGTTGATCCACATTTTAAATTTGAATAG 1260 0.4 MENLPVEVIGNILSHLKAARDVVIASATCKKWRIACCKHLHTISFSSNDWSVYRDMTTTRLEILITQTIFQTSGLQSLSILMEDVDEFSASAVIAWLMYTRETLRQLFYNVKTMPNVNILEICGRHKLEILDLAHNSIVGVEPNYQRFPCLKSLSLSYVSISALDLNLLVSACPRIEVLELVNPEIAMSDAQVSVELSSSTLKSVYVEAISLDKFILEADGIECLHLKDCALEDFELIGKGTLKNFRIDDVSVIHLDIGEIVENLETVDISNFTIIWPKFYQMISRSSNLKRLRLWDVMFDDEDEVVDLETIATCFPHLTHLSLSYDVRDGVLHYSLQGSSYLENVVVLELGWNVINDLFSQWVEGLLKRCPILKKLVIYGVVSEAKSDEECKMLANFTTSMVELMRRYTDVDPHFKFE* 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g1515 419 SUPERFAMILY RNI-like 36 382 - -
Tpr4g1515 419 SUPERFAMILY F-box domain 2 44 IPR036047 GO:0005515
Tpr4g1515 419 SMART fbox_2 4 45 IPR001810 GO:0005515
Tpr4g1515 419 Gene3D Ribonuclease Inhibitor 220 409 IPR032675 -
Tpr4g1515 419 PANTHER F-BOX PROTEIN-LIKE 1 417 - -
Tpr4g1515 419 PANTHER - 1 417 - -
Tpr4g1515 419 Pfam F-box-like 2 39 IPR001810 GO:0005515
Tpr4g1515 419 Gene3D Ribonuclease Inhibitor 100 205 IPR032675 -
Tpr4g1515 419 Gene3D - 2 50 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g1515 Tpr-Chr4 14905590 14907655 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g1515 - - gmx:100804357 747.273
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g1515 4 14905590 14907655 Tpr4g1515 4 14905590 14907655 ECH