Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g1512 ATGGAACCGATTCCATTCTTTGTAAATTTTTATGGCATAAATTCATTCAACAATCAACAATATCGGTGTTGGGTGATCATGGCATCAATGTCCACTGTGAACGTTTCCCCCCTATCCATGTTTCAAACTGCAAGCCGCAATCAATCAACCAGTGCTGCTACCACAGTGAAGTGCCCTTCCTCTTTTGGGTCGACAAAGAGTGTTTCCAGGTCTTTTGGCTTGAAGTCATCCTCTTCATATAGAACGACTGCAATGGCCGCTTACAAGGTTAAGCTAATCGGACCAGATGGAAAAGAGGACGAGTTTGATGCCCCGGATGATGTTTACATCTTAGACGCAGCAGAGAATGCTGGAGTTGAACTCCCTTATTCGTGCCGCGCTGGAGCATGCTCTACTTGTGCTGGAAAGATTGTTTCTGGTTCAGTGGATCAGTCTGATGGCTCTTTCTTGGATGACAATCAACTTAAGGAAGGCTTTGTGCTTACCTGTGTTTCCTATCCAACCGCAGACGTTGTAATTGAAACTCACAAGGAAGGAGAACTTTACTGA 549 0.4463 MEPIPFFVNFYGINSFNNQQYRCWVIMASMSTVNVSPLSMFQTASRNQSTSAATTVKCPSSFGSTKSVSRSFGLKSSSSYRTTAMAAYKVKLIGPDGKEDEFDAPDDVYILDAAENAGVELPYSCRAGACSTCAGKIVSGSVDQSDGSFLDDNQLKEGFVLTCVSYPTADVVIETHKEGELY* 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g1512 182 CDD fer2 90 174 IPR001041 GO:0051536
Tpr4g1512 182 ProSitePatterns 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 125 133 IPR006058 GO:0051537
Tpr4g1512 182 PANTHER FERREDOXIN 30 182 - -
Tpr4g1512 182 PANTHER FERREDOXIN 30 182 - -
Tpr4g1512 182 ProSiteProfiles 2Fe-2S ferredoxin-type iron-sulfur binding domain profile. 88 179 IPR001041 GO:0051536
Tpr4g1512 182 Gene3D - 85 182 IPR012675 -
Tpr4g1512 182 TIGRFAM fdx_plant: ferredoxin [2Fe-2S] 86 182 IPR010241 GO:0009055|GO:0022900|GO:0051537
Tpr4g1512 182 Pfam 2Fe-2S iron-sulfur cluster binding domain 95 168 IPR001041 GO:0051536
Tpr4g1512 182 SUPERFAMILY 2Fe-2S ferredoxin-like 81 181 IPR036010 GO:0051536
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g1512 Tpr-Chr4 14885137 14887931 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g1512 K02639 - gmx:100785611 265.388
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g1512 4 14885137 14887931 Tpr4g1512 4 14885137 14887931 ECH