Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g1510 ATGACAAGCTTTTCCTTCTTCACCTCACTTCTTTTCTTTCTTCTCACCATTTCAGATTCATTATTTATGAAAATCAATGGCCTAAGTTTTGGAATAAACTATGGACAAGTAGGAAATAATCTACCTTCTCCTTCAAGAGTAGCTGTTCTTATAAGATCAATGAATGTAACAAGAATCAAACTCTATGATGCTGATCCAAATGTTCTACATGCTTTCTCTCAATCAAATGTTGAATTTGTTATAGGAATTGGAAATGAGCATTTACAAAATATGACAAATCTTTCAAATGCTCAAATTTGGATTCAACATCATGTTCTACCTTATCTTTCACAAACAAAAATAATTTCCATAAATGTAGGAAATGAAGTATTCAATAGTAATGATACTCAATTAATTTTAAACCTTCTTCCTTCAATGCAAAATGTCCATAATGCCCTTGTTAATCTTGGATTAGACAAACTAATTAGTGTCACAACAGCTCATTCTTTTAACATTTTGGAAAATTCTTACCCTCCTTCTTATGGTTCTTTTAAGCAAGATTTGATGCAATATATTCAACCACTTGTTGAATTTCTTGATGAAATTAATTCACCTTTTCTTATTAATGCTTATCCTTTTTTTGCTTATAAAGATAACCCTAATGAGGTATCTTTAAACTATGCATTATTTCAACCAAATCAAGGTTTGGTTGATCCAAATACAAATTTACATTATGATAACATGTTGTATGCACAAATTGATGCTGTTTATGCCGCAATCAAAGCGATAGGATATACGAATGTTGAAGTTAAGGTTTCTGAGACCGGTTGGCCTTCAAATGGCGATTCCGATGAAATTGGAGCTACACCTCAAAATGCAAAATTGTATAATGGAAATTTGCTTAGAAGAATTGAGGAAAAACAAGGAACTCCTGCAAAACCTTTGGTTCCAATTGATGTATATGTTTTTGCACTTTTTAATGAAGATTTGAAGCCTGGTCCTGCTTCTGAGAGAAACTATGGACTTTATTATCCTAATGGTAGTCCAGTTTATAACATTGGATTGCAGGGTTATCTTCCACAGATGGTTGTTCCTTCCAAATCTAAGGTTTTGTCTTTCAATTTTCTTGTATGTATAGTTACATGCATGATTTTTACTTGGGAGCTTTCAGGATCATAA 1158 0.3212 MTSFSFFTSLLFFLLTISDSLFMKINGLSFGINYGQVGNNLPSPSRVAVLIRSMNVTRIKLYDADPNVLHAFSQSNVEFVIGIGNEHLQNMTNLSNAQIWIQHHVLPYLSQTKIISINVGNEVFNSNDTQLILNLLPSMQNVHNALVNLGLDKLISVTTAHSFNILENSYPPSYGSFKQDLMQYIQPLVEFLDEINSPFLINAYPFFAYKDNPNEVSLNYALFQPNQGLVDPNTNLHYDNMLYAQIDAVYAAIKAIGYTNVEVKVSETGWPSNGDSDEIGATPQNAKLYNGNLLRRIEEKQGTPAKPLVPIDVYVFALFNEDLKPGPASERNYGLYYPNGSPVYNIGLQGYLPQMVVPSKSKVLSFNFLVCIVTCMIFTWELSGS* 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g1510 385 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE 14 14 363 - -
Tpr4g1510 385 Gene3D Glycosidases 29 352 - -
Tpr4g1510 385 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 14 363 IPR044965 GO:0004553|GO:0005975
Tpr4g1510 385 SUPERFAMILY (Trans)glycosidases 30 347 IPR017853 -
Tpr4g1510 385 Pfam Glycosyl hydrolases family 17 31 346 IPR000490 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g1510 Tpr-Chr4 14878448 14881605 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g1510 80 380 Glycoside Hydrolase AT2G27500 61.921 4.59e-145 412
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g1510 - - ccaj:109798347 613.224
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g1510 4 14878448 14881605 Tpr4g1510 4 14878448 14881605 ECH
Tpr7g4672 7 55048969 55054652 Tpr4g1510 4 14878448 14881605 PCT