Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g1507 ATGGCGGTGAGGGCCACAGTCTCGCGTTTCCCAATTGATACAGACGCACGCGAAGTTTCCGGCCTCTTATGGGGAGTAACCGTCGCACCCTTCGCCGCCGTCGACGAAAACGGCCAATCTCCGGTATACGGATCCGACGGCGACCTCTTACCTCGTTGCGAGAATTGCTGGGCTTACTTCAACACCTACTGCGAACTTGAACAATGGTCATGGTCTTGCTCTCTCTGCGGTAATCTCAATGGTCTCTCTTCTGATGCTATCGAACGATATTCTCGTCCTCAATCTTGCGCTGAAATGATGTCTTCGTTTATAGATCTTGAATTGCCTCCGCAAGAATCGTCTGATGCTGCTGCATTGCAAGCTTGTCCTGTTTATGTTGCTGCTGTTGACTTGTCATCTTCCGAGGAGTTTCTGGAACTCACTAAAAGTGCGTTGCTGGCAGCTATGGAAGCTCTTGCTCCTGGTTCACTTTTTGGGCTTGCTACATTCAGCCATAAACTAGGACTGTATGATGTTCAAGGTCCAATACCTGTGGTGAAAAATGTTTTCGTCCCTCCTGATGCAGAGGGCACCTTATCAATTGAGCTTGAAGATGTCATGCCTTTGTTACAATTTCTGGCTCCCGTGGATACTTGTAAGGACCGTATTGCATCTGCACTTGAATCACTTAGACCAACAACTTCATGGGAGAGAACCGCCGGATCAGGTCAAGGAATGGAAGGTGTTCTGCTAGGTGGGCGTGGTTTTGGGGTGGCAATGGAAGCCCTCTGCAGTTACCTTGGATTTGAATATGGAAACACTTTTGCATTAGCTAGAATCTTTGTGTTCTTGTCTGGTCCTCCTGATTATGGAGCTGGACAATTGGACACAAGGCGATATGGCGAGCAATATGCAAGCAAAGGGGAGGATGCAGATCGTGCTCTACTCCCAGAGCAGACACCATTTTATAAAGATCTGGTATTTAACTTATTGATATTGTTACTGCTCTTTCCCATTTACGTAGAAGTGGAAGAATTGACATGTGTTTCACAGGCTGCTGTTGCTGTTCAAGCAGGTGTATGTGTTGACATATTTGCTGTAACAAATGAGTATACTGATTTGGCATCACTAAAATTTCTCAGTATTGAAAGTGGGGGCTCTTTATTTTTTTATACAAGTACCGAAGATTCAACTTTGCCTCAGGACATATATCGTATGCTAAGTAGGCCATATGCTTTTGGTTGTGTCCTGCGATTAAGAACCTCAACTGAATTTAAGCCTGGAAATTCTTATGGTCACTTCTTTCCAGATCCAGAGTATGAAAATGTTCAACATGTCATATGCTGTGATTCTTATGCTACATATGCTTATGACTTTGTGTTTGAGAACAACATTGGATTTTCAAGTAAAGCAGATGTTCCTACACTCCAGATTGCATTCCAGTACTCAGTTGTAGTTCCTCCTCAGGAGCTTTCCAATTCAGGCGAGGTCTCTACAAGCAGAACCAAGCATCATTCCCTTCAACGTCGGCTAAGGATCCGAACGGTGCAGTTTGGTGTTGCTCAGAACATTAACGAACTTTACGACAGCTGTGATCCTGAAGTTGTTCTATCTTTGCTCGTGCACAAGGTTATACTTGCCTCTTTGGAGGAAGGAGTTCGGGAGGGTAGACTTCTGCTTCAAGAATGGCTAGTTATCCTTACAGCTCAGTACAATGATGCTTATAAACTTGTTCAGTATAGTAGTGGAAGTTCGATAAGATCTCAGCTTGATGTTGCCTTCTCTCAATGTCCTCAACTGCAGCCCCTACCACGTCTAATCTTTGCTCTCCTTCGAAACCCTCTTCTTCGCTTTCACGAAGAAGGTGTTCATCCCGACTATCGCATATATCTTCAATGCTTGTTTAGTGCGTTGGAACCGAGTTCCCTTCATCGTGCTGTGTATCCAGTATTGACTTCATATGCTACTCCAGACAAACAAGCATATCCTCGCCATTCCTTGAGTCGGGCTGCACTGCTTACCAGTGGCAGTCCAATATTTTTCCTGGATGCGTTCACAATTCTGATTGTGTTTTATTCTTCAACTGCAGACCCAACACTTCCTTTTCCTCCACCCCATGATTGTTTGTTAAGAAATACAATCAACAAATTGAAGAAAGAGAGATGCATCACTCCGAAACTCATTTTTATTCGAGGAGGGCAGGATGATGCCTCAATTTTCGAGAACTTCCTGATTGAAGAGCAGGATGTTGATGGAAGCGGTCTTACAAGTGTGATGGGTTTCGTTTCCTTCCTTGAAGATATAACTGTGAAAGTTTTAGAATTCATCAAATAG 2313 0.4414 MAVRATVSRFPIDTDAREVSGLLWGVTVAPFAAVDENGQSPVYGSDGDLLPRCENCWAYFNTYCELEQWSWSCSLCGNLNGLSSDAIERYSRPQSCAEMMSSFIDLELPPQESSDAAALQACPVYVAAVDLSSSEEFLELTKSALLAAMEALAPGSLFGLATFSHKLGLYDVQGPIPVVKNVFVPPDAEGTLSIELEDVMPLLQFLAPVDTCKDRIASALESLRPTTSWERTAGSGQGMEGVLLGGRGFGVAMEALCSYLGFEYGNTFALARIFVFLSGPPDYGAGQLDTRRYGEQYASKGEDADRALLPEQTPFYKDLVFNLLILLLLFPIYVEVEELTCVSQAAVAVQAGVCVDIFAVTNEYTDLASLKFLSIESGGSLFFYTSTEDSTLPQDIYRMLSRPYAFGCVLRLRTSTEFKPGNSYGHFFPDPEYENVQHVICCDSYATYAYDFVFENNIGFSSKADVPTLQIAFQYSVVVPPQELSNSGEVSTSRTKHHSLQRRLRIRTVQFGVAQNINELYDSCDPEVVLSLLVHKVILASLEEGVREGRLLLQEWLVILTAQYNDAYKLVQYSSGSSIRSQLDVAFSQCPQLQPLPRLIFALLRNPLLRFHEEGVHPDYRIYLQCLFSALEPSSLHRAVYPVLTSYATPDKQAYPRHSLSRAALLTSGSPIFFLDAFTILIVFYSSTADPTLPFPPPHDCLLRNTINKLKKERCITPKLIFIRGGQDDASIFENFLIEEQDVDGSGLTSVMGFVSFLEDITVKVLEFIK* 771
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g1507 770 Pfam Sec23/Sec24 trunk domain 122 398 IPR006896 GO:0006886|GO:0006888|GO:0030127
Tpr4g1507 770 Gene3D Sec23/Sec24 helical domain 497 653 - -
Tpr4g1507 770 SUPERFAMILY Helical domain of Sec23/24 525 641 IPR036175 GO:0006886|GO:0006888|GO:0030127
Tpr4g1507 770 SUPERFAMILY beta-sandwich domain of Sec23/24 3 524 - -
Tpr4g1507 770 SUPERFAMILY vWA-like 123 402 IPR036465 -
Tpr4g1507 770 PANTHER OS05G0443300 PROTEIN 1 319 - -
Tpr4g1507 770 PANTHER OS05G0443300 PROTEIN 344 768 - -
Tpr4g1507 770 SUPERFAMILY Zn-finger domain of Sec23/24 41 111 IPR036174 GO:0006886|GO:0006888|GO:0008270|GO:0030127
Tpr4g1507 770 PANTHER SEC24-RELATED PROTEIN 1 319 - -
Tpr4g1507 770 PANTHER SEC24-RELATED PROTEIN 344 768 - -
Tpr4g1507 770 Pfam Sec23/Sec24 helical domain 525 637 IPR006900 GO:0006886|GO:0006888|GO:0030127
Tpr4g1507 770 Gene3D - 31 101 - -
Tpr4g1507 770 Gene3D von Willebrand factor, type A domain 122 404 IPR036465 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g1507 - - gmx:100807557 1370.53
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g1507 4 14838065 14845250 Tpr4g1507 4 14838065 14845250 ECH