Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g1475 ATGGAGCACCCTTCTACTAGAAATATCCTGTCAAGAAGTTCTGATACCGGGCGTCTAGCCTTGACAGTGGTATCCATCTTTGTCCTTTTAATGGCTGTTATTGGTATAGCTTGGTTTGTCATGCATCCGCACGACCCTAGTTTTGCAGTAACATCACTTTCTGTCTCGAACTTCACTGTATCGGATTCACAGATTACATCCATGTACGAGGTTAGACTAACCGTAACAAATCAAAACAAGAAAATCCAACTGATTCTCGACGATTTCATCGTGGTAATACTTTACAGTGAGGTCGTGCTCTCGATGGCCGAGGTGCAACAGCCTTTACTTTTGGTGAAGATGAGCAATAAGAGTGTGAATGTTGAGTTGGTAATGAAGAATTCAGTAAAGTTGGTGCAAGAGAATCTAGTTAAGGAGTGGAATAAAGGGGTGGTGAATTTTGATGTTAAGATGGTTGTTAGAGTTAGATTTGAAGCTGGAATATGGCCAAGTAAGGAAAAAATATTGTGTGTTTATTGTGAGGAATTGGATGTGGAATTCTATTCTCCAAAAAATACTGGAAAACTTACGGGAATAGGGAAGAATTGTCACATAGTTGATGCTAAACCATAG 612 0.3971 MEHPSTRNILSRSSDTGRLALTVVSIFVLLMAVIGIAWFVMHPHDPSFAVTSLSVSNFTVSDSQITSMYEVRLTVTNQNKKIQLILDDFIVVILYSEVVLSMAEVQQPLLLVKMSNKSVNVELVMKNSVKLVQENLVKEWNKGVVNFDVKMVVRVRFEAGIWPSKEKILCVYCEELDVEFYSPKNTGKLTGIGKNCHIVDAKP* 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g1475 203 PANTHER HARPIN-INDUCED 1 17 196 - -
Tpr4g1475 203 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 17 196 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g1475 Tpr-Chr4 14519716 14520327 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g1475 20 160 EF-hand Containing Proteins AT5G21130 26.000 1.52e-06 45.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g1475 - - adu:107477673 203.371
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g1475 4 14519716 14520327 Tpr4g1475 4 14519716 14520327 ECH