Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g1473 ATGAAAAAGCAAAATGAAGAGCGAGTTGTTATCTTAGGAGGCGGTGTTGCCGGTTCTCTCATCGCTAAATCTCTTCAATTTAATGCACATGTCACCCTCGTTGATCCGAAGGAATATTTTGAGATTTCATGGGCAAGTTTGAGGGCAATGGTGGAGCCATCCTTTGCAGAAAGGACAGTGATAAATCATAGAGATTACTTCACAAAAGGTGACCTTGTTACATCCAACGCTGTCAGTGTGACGGAAACCGAAGTGTTGACTGCAGATGGTCATCGGATTGAGTATGACTATCTTGTTATTGCCACTGGTCATGCGGATCCTGTACCCAAACTTAGGAGCGAAAGACTTCATCAATATACAGAAGAAAATGAAAAGATAAAATCTGCTCATTCCATTCTGATTGTTGGAGGTGGTCCTACTGGTGTGGAACTTGCTGGAGAGATAGCCGTTGATTTTCCGGATAAGAAGATTACTCTAGTGCACAAAGGACCAAGGTTGTTGGAATTCATAGGGGCAAAAGCTGCTGATAAGACTCTAAAATGGTTGAAATCTAAGAAGGTTGAGGTGAAACTAGAACAAGCAGTTGACTTAAACAGTACCACAGACGGAGACCGCACGATATATCAAACTTCAGTTGGGGAGACCATTGAAGCAGATTGTCATTTCTTATGCACGGGAAAGCCACTTGCTTCGACATGGCTTAAGGAAACTGTGTTGAAAAATGACTTGGACGTTCAGGGAAGGATTAAGGTAGATGAAAACTTGAGAGTCAAGGGCCGGAGCAACATTTTCGCAATTGGAGATATTACAGATATTTCAGAACTCAAGCAAGGGTTTTTGGCACAAAAGCAGGCGGGAGTGGTCGCAAAGAACTTGCGGCAGATGATGGAGGGAGGTAAAGAATGTTGGAGGGAAACTTACAAACCACATCCAGTAATGGCAATAGTTTCACTAGGGAGGAATGATGCAGTGGCACAGTTCCCATTCCTAACAATCAGTGGAAGAATACCTGGCTTCATCAAATCTAGAGATTTGTTTGTTGGTAAAACAAGAAAACAAATGGGACTCAACCCTCATATTGTATAA 1086 0.4245 MKKQNEERVVILGGGVAGSLIAKSLQFNAHVTLVDPKEYFEISWASLRAMVEPSFAERTVINHRDYFTKGDLVTSNAVSVTETEVLTADGHRIEYDYLVIATGHADPVPKLRSERLHQYTEENEKIKSAHSILIVGGGPTGVELAGEIAVDFPDKKITLVHKGPRLLEFIGAKAADKTLKWLKSKKVEVKLEQAVDLNSTTDGDRTIYQTSVGETIEADCHFLCTGKPLASTWLKETVLKNDLDVQGRIKVDENLRVKGRSNIFAIGDITDISELKQGFLAQKQAGVVAKNLRQMMEGGKECWRETYKPHPVMAIVSLGRNDAVAQFPFLTISGRIPGFIKSRDLFVGKTRKQMGLNPHIV* 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g1473 361 Pfam Pyridine nucleotide-disulphide oxidoreductase 8 272 IPR023753 GO:0016491
Tpr4g1473 361 SUPERFAMILY FAD/NAD(P)-binding domain 3 274 IPR036188 -
Tpr4g1473 361 PRINTS FAD-dependent pyridine nucleotide reductase signature 9 28 - -
Tpr4g1473 361 PRINTS FAD-dependent pyridine nucleotide reductase signature 95 113 - -
Tpr4g1473 361 PRINTS FAD-dependent pyridine nucleotide reductase signature 131 149 - -
Tpr4g1473 361 PRINTS FAD-dependent pyridine nucleotide reductase signature 248 270 - -
Tpr4g1473 361 PANTHER APOPTOSIS-INDUCING FACTOR 1 7 360 - -
Tpr4g1473 361 PANTHER NADH:UBIQUINONE REDUCTASE (NON-ELECTROGENIC)-RELATED 7 360 - -
Tpr4g1473 361 Gene3D - 5 354 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g1473 Tpr-Chr4 14490367 14494290 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g1473 9 276 EF-hand Containing Proteins AT4G28220 23.669 2.89e-07 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g1473 K22745 - gmx:100813439 585.874
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g1473 4 14490367 14494290 Tpr4g1473 4 14490367 14494290 ECH