Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g1472 ATGGTGGAAAAGAAAGTTGTGATTATTGGAGGTGGTGTTGCTGGTTCTGTTCTTGCTAAAACTTTACAACATCTTGCTAATGTCACTCTTATTGATCCGAAGGAATATTTTGAGATTCCATGGGCAAGTTTGAGGGCAATGGTGGAACCATCATTTGCAGAAAGGACAGTGATTAACCATAGAGAATATTTCACAAAAGGTGACCTTATTGTATCAACTGCCACCAACATAACTGAATCTGAAGTCTTCACTGCCGATGGCCGTCAGATTGCATATGATTATCTTGTTATTGCAGCCGGTCACGCAGATCCTATCCCGAAAACAAGGACCGAAAGACTTGATCAGTACAAAGGAGAAAATACAAAGATAAAATCTGCGCGTTCAATTTTAATTGTCGGAGGAGGACCAACCGGTGTCGAGCTAGCAGCTGAGATAGCTGTTGATTTTCCTGACAAAAAAGTGACAATAGTCCATAAAGGATCAAGATTGCTAGAATATATCGGACCAAAAGCTTCAAGAAAGACATTAAAATGGCTTAAATCAAGGAAAGTTAATGTGAAGCTAGATCAATCAGTTGACATTGATTCATTCACAAATGAGACTTATCAAACTTCAGCTGGAGAGACTATAGAAGCAGATACACATTTTGTATGTATAGGGAAGCCACTTAGTTCAAGATGGCTCGGAGAAACGTTTTTGAAAGACGGTTTGGATGGTAATGGAAGAGTTCAAGTTGATGAATACTTGAGAGTTAAGGGTAGAAGCAATGTTTTTGCAATTGGAGATATTACAGATATTCAAGAAATAAAACAAGGAGTGTATGCACAAGGCCATGCTAAATTAGTAGCGAAGAATCTAAAGCTATTGATCGAAGGAGGAGCGAAAGAACCTAAATTGGGAACTTACAAGGCACAAGCTCCAATATCTATTGTTTCGCTCGGACGAAAACATGGAGTTGCACAGTTCCCTTTCATGACAGTTGTTGGAAGGTTTCCTGGTATTATCAAATCAGGAGATTTGTTTGTTGGAAAAACAAGAAAGGAATTAGGACTTGAACCTAATGCTAAAAAATCTTAA 1077 0.3844 MVEKKVVIIGGGVAGSVLAKTLQHLANVTLIDPKEYFEIPWASLRAMVEPSFAERTVINHREYFTKGDLIVSTATNITESEVFTADGRQIAYDYLVIAAGHADPIPKTRTERLDQYKGENTKIKSARSILIVGGGPTGVELAAEIAVDFPDKKVTIVHKGSRLLEYIGPKASRKTLKWLKSRKVNVKLDQSVDIDSFTNETYQTSAGETIEADTHFVCIGKPLSSRWLGETFLKDGLDGNGRVQVDEYLRVKGRSNVFAIGDITDIQEIKQGVYAQGHAKLVAKNLKLLIEGGAKEPKLGTYKAQAPISIVSLGRKHGVAQFPFMTVVGRFPGIIKSGDLFVGKTRKELGLEPNAKKS* 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g1472 358 Pfam Pyridine nucleotide-disulphide oxidoreductase 4 278 IPR023753 GO:0016491
Tpr4g1472 358 PANTHER APOPTOSIS-INDUCING FACTOR 1 1 358 - -
Tpr4g1472 358 PANTHER NADH:UBIQUINONE REDUCTASE (NON-ELECTROGENIC)-RELATED 1 358 - -
Tpr4g1472 358 SUPERFAMILY FAD/NAD(P)-binding domain 1 286 IPR036188 -
Tpr4g1472 358 PRINTS FAD-dependent pyridine nucleotide reductase signature 6 25 - -
Tpr4g1472 358 PRINTS FAD-dependent pyridine nucleotide reductase signature 128 146 - -
Tpr4g1472 358 PRINTS FAD-dependent pyridine nucleotide reductase signature 212 228 - -
Tpr4g1472 358 PRINTS FAD-dependent pyridine nucleotide reductase signature 242 264 - -
Tpr4g1472 358 Gene3D - 1 342 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g1472 Tpr-Chr4 14484279 14487809 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g1472 129 270 EF-hand Containing Proteins AT4G28220 26.582 4.38e-06 46.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g1472 K22745 - gmx:100813980 560.836