Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g1461 ATGGGGAAAAATCAAAAGACAGAGCTAGGAAGAGCCCTTGTGAAGCAACACAATCAAATGATTCAACAAACAAAGGAGAAAGGTCGAATCTATAAGAAGAAGTTTCTCGAATCATTCACCGAAGTTTCTGATATCGATGCTATAATCGAACAAAATGATGAAGATCATGAACAAGAACTCCTTGATCTTCCTCTTCCTCCACCCACTTCCCGTATTAATCTGGATGTTGAGTCTGGTAGTGGTTTTAATGGTTTGACGGCTGAAGAAATTAAGAAGGAACAGAAGATTGAAGAGGCGTTGCATGCTAGCAGTCTTCGAGTACCACGCAGGCCTTCATGGAGTGCTGAAATGTCTGCTGACGAGCTTCATGCCAATGAAACACAACATTTCTTAACTTGGCGCCGTAGCCTAGCCAGACTTGAAGAAAATAAGAAGCTTGTTCTTACTCCATTTGAGAAAAATCTTGATATCTGGAGACAACTCTGGCGGGTTGTTGAGCGCAGTGATTTGCTTGTTATGGTTGTTGATTCACGAGATCCACTGTTCTATCGCTGTCCTGACCTTGAGGCTTATGCAAAGGAGGTTGATGTGCATAAACGCACATTGCTTTTGGTCAATAAGGCAGATCTTTTACCCGCTTCTGTCAGGGAGAAATGGGCAGAATACTTTCGTGCTCATGATATTCTCTTTATCTTCTGGTCAGCGAAAGCCGCTACTGCAGTTTTGGAAGGCAAAAAGCTCGGTACATCACAGGTTGATAACATGTCGAGCGCTAATAACCCAGACACGAAGATCTATGGAAGGGATGAGCTCTTATCCCGCCTGCAATCAGAGGCAGAAGCTATAGTAGACATGAGAAGAAATTCAGATTCCTCAAGTGAAAATGCTTCTGTTAGTTCATCATCGAGTCATGTAGTTGTGGGATTTGTTGGATATCCTAATGTAGGGAAAAGTTCAACTATCAATGCGCTGGTTGGCCAGAAAAAAACTGGTGTCACCTCTACCCCAGGAAAAACAAAGCACTTTCAGACTTTAATTATTTCTGAAAAGCTAACCCTTTGTGACTGTCCCGGATTAGTTTTTCCATCTTTTTCAAGCTCAAGATATGAGATGATTACTTGTGGGGTGTTGCCAATTGATAGGATGACCGAACACAGGGAGTGTGTCCAGGTTGTCGCCAATAGAGTCCCTAGGCATGTCATAGAACAGGTCTATAAGATCAGTCTTCCTAAACCTAAGTCATATGAGTCCCAAACCCGTCCCCCTCTAGCATCTGAACTTTTGAGAACATATTGTGCTTCTCGTGGGCAATCTACTTCTAGTGGACTGCCTGATGAAACCAGGGCTTCTCGTCAGATACTGAAAGATTACATTGACGGAAAGCTGCCTCACTATGCGATGCCCCCTGACGTGTCAGATGTGGAATTATCATCAGAAGATCCTAATGGACACGACCAAGTTAATTTGAATGTGTCAGATTCATCTGATATTGAAGATTCTTCAGTTGCTGAGACTGAACCTGCACCAAAACTTGAACACGTATTGGACGACCTTAGTTCATTTGACATTGCTAATGGACTTGCTTCAAACAAAGCTGCGGCTAAGAAGGCCAAGGAATCTCATAAGCATCATAAAAAGCCGCAGAGGACAAAAGATCGTTCGTGGAGAGCAGGGAATGCAGTGAAAGATGATAGTGATGGGATGCCAATTGCAAGATTTCATCAGAAACCAATAAATGCAGGTCCTCTGAAGGTTTGA 1758 0.4295 MGKNQKTELGRALVKQHNQMIQQTKEKGRIYKKKFLESFTEVSDIDAIIEQNDEDHEQELLDLPLPPPTSRINLDVESGSGFNGLTAEEIKKEQKIEEALHASSLRVPRRPSWSAEMSADELHANETQHFLTWRRSLARLEENKKLVLTPFEKNLDIWRQLWRVVERSDLLVMVVDSRDPLFYRCPDLEAYAKEVDVHKRTLLLVNKADLLPASVREKWAEYFRAHDILFIFWSAKAATAVLEGKKLGTSQVDNMSSANNPDTKIYGRDELLSRLQSEAEAIVDMRRNSDSSSENASVSSSSSHVVVGFVGYPNVGKSSTINALVGQKKTGVTSTPGKTKHFQTLIISEKLTLCDCPGLVFPSFSSSRYEMITCGVLPIDRMTEHRECVQVVANRVPRHVIEQVYKISLPKPKSYESQTRPPLASELLRTYCASRGQSTSSGLPDETRASRQILKDYIDGKLPHYAMPPDVSDVELSSEDPNGHDQVNLNVSDSSDIEDSSVAETEPAPKLEHVLDDLSSFDIANGLASNKAAAKKAKESHKHHKKPQRTKDRSWRAGNAVKDDSDGMPIARFHQKPINAGPLKV* 586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g1461 585 Pfam 50S ribosome-binding GTPase 307 363 IPR006073 GO:0005525
Tpr4g1461 585 PANTHER LARGE SUBUNIT GTPASE 1 HOMOLOG-RELATED 1 549 IPR043358 GO:0003924
Tpr4g1461 585 MobiDBLite consensus disorder prediction 536 551 - -
Tpr4g1461 585 Gene3D - 157 363 IPR027417 -
Tpr4g1461 585 ProSiteProfiles Circularly permuted (CP)-type guanine nucleotide-binding (G) domain profile. 158 362 IPR030378 GO:0005525
Tpr4g1461 585 CDD HSR1_MMR1 157 362 - -
Tpr4g1461 585 PANTHER GTPASE LSG1-1 1 549 - -
Tpr4g1461 585 PRINTS GTP1/OBG GTP-binding protein family signature 307 327 IPR006073 GO:0005525
Tpr4g1461 585 PRINTS GTP1/OBG GTP-binding protein family signature 353 368 IPR006073 GO:0005525
Tpr4g1461 585 MobiDBLite consensus disorder prediction 530 585 - -
Tpr4g1461 585 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 156 415 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g1461 Tpr-Chr4 14235925 14240808 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g1461 K14539 - gmx:100817523 842.417
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g1461 4 14235925 14240808 Tpr4g1461 4 14235925 14240808 ECH