Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g1456 ATGGATTTTCATTCTCTTCCCAATTTCTTTCTTCTTCTCTCCTTCTCCACCCTCTTCCTTTCATTTTCACACGTTCAAGCTCAAATTACTTTCAAATATTGCGATAAGAAGGCAAACTATCCTGTGAAGGTGACTGGAATTGAAATATTGCCAAATCCTGTGGTCAGTGGTGATCCAGCCAACTTTAAGATCTCAGCTACTTCTGGTAAAGCTATTCATGGTGGAAAGGTGGTAATTGGAGTTTCCTATGTTGGGGTGCCTGTCCATTCTGAAACCATTGATCTGTGCAAGGAAGTATCTTGTCCCGTTGCTAATGGAAATTTTGTGATTTCTCACACCCAAACACTGCCTTCAATTACTCCACCGGGACCTTATACTCTGAAGATGACACTGAAGGATGACAATGGAGGCCAGTTAACTTGCATCAAGTTTAATTTTAAAATCGTTCTCAGATCCCTTGTGTCCGACATGTGA 474 0.4114 MDFHSLPNFFLLLSFSTLFLSFSHVQAQITFKYCDKKANYPVKVTGIEILPNPVVSGDPANFKISATSGKAIHGGKVVIGVSYVGVPVHSETIDLCKEVSCPVANGNFVISHTQTLPSITPPGPYTLKMTLKDDNGGQLTCIKFNFKIVLRSLVSDM* 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g1456 157 Pfam ML domain 29 148 IPR003172 -
Tpr4g1456 157 PANTHER LEGUMINOSIN GROUP578 SECRETED PEPTIDE 10 152 - -
Tpr4g1456 157 SMART pgtp_13 31 146 IPR003172 -
Tpr4g1456 157 CDD PG-PI_TP 31 146 IPR033917 GO:0032366
Tpr4g1456 157 PANTHER NIEMANN PICK TYPE C2 PROTEIN NPC2-RELATED 10 152 IPR039670 -
Tpr4g1456 157 Gene3D - 27 151 - -
Tpr4g1456 157 SUPERFAMILY E set domains 28 149 IPR014756 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g1456 Tpr-Chr4 14190441 14198659 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g1456 - - pvu:PHAVU_011G100100g 222.631
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g1456 4 14190441 14198659 Tpr4g1456 4 14190441 14198659 ECH