Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g1423 ATGGGTTACTCCAAAGAATGTTGTGTCTTATTATTGTTCTTAGTGTTACTAGTTGCATGTGTTAGTGGAGAAGATCCTTATAGGTTTTATACTTGGAATGTTACATATGGTGATATTTATCCACTTGGAGTTAAACAACAGGGGATATTGATAAATGGACAATTTCCAGGGCCACAGATTGAGTCAGTGACAAATGATAACTTGATTATCAATGTTTTCAATAGCTTGGATGAACCTTTTCTTATATCCTGGAATGGAGTGCAGCAGAGGAGAAACTCATGGCAGGATGGAGTGTCTGGTACAAATTGTCCAATCTCACCAGGACAGAACTTCACTTACATTCTTCAAGTAAAAGATCAAATTGGTAGCTATTTCTACTTTCCTTCCCTTGCATTCCACAAAGCAGCAGGCGGTTACGGCGGTTTCAAAATCGCTAGTCGTTCCATGATTCCTGTACCTTTTGATCCTCCATCAGGAGATTTCACCATATTGGCAGGAGATTGGTACAAGAGAAATCACACAGATTTGAGGGCGATTTTAGATAGTGGAAGTGACCTTCCTTTCCCTGATGGACTTATTATCAATGGCCATGGTTCCAATGCTTACACATTCACAGTTGATCAAGGCAAGACTTACCGGTTCCGGATATCAAACGTGGGACTTACTACTTCGATAAATTTCAGAATCCAAGGGCATAAGATGAAGCTAGTTGAGGTGGAAGGAACTCACAGTCTCCAAAACACTTATGATTCACTTGACATTCATTTGGGGCAGACTTATTCTGTATTAGTTACTGCTGATCAACCACCAAATGACTACTACATTGTTGTCACAACAAGATTCACCTCACAAGTTCTTAATGCTTCATCCATTCTTCATTACAGTAACTCAGCAGGAAGTGTTTCTGGTCCTCTCCCTGGTGGACCAACAACTGAGATTGATTGGTCCGTTGAACAAGCTCGGTCTATTAGGAGGAATCTTACAGCAAGTGGGCCAAGACCAAATCCACAAGGATCATACCATTATGGAATGATAAACACAACACGTACAATTAGACTTCAAAATTCTGCTCCAATTATCAATGGAAAACAAAGATTTGCTGTAAACAGTGTGTCCTTTATCCCAGCTGATACACCACTTAAGCTAGCTGATTACTTCAAGATTCAAGGGGTGTTTTCACTTGGAAGTATCTCAGACAACCCCACTGGCGGAGGCGGTTATCTTCAGACTTCTGTCATGGAGGCCGATTTTCGAGGTTTTGTAGAGGTTGTTTTTGAGAATCCTGAAGACACTTTGCAATCATGGCACATTGATGGACACAGCTTCTTTGTAGTAGGGATGAATGGAGGACAATGGTCAGCTGCAAGCAGACTAAACTACAATTTAAGAGATACGATTTCTCGTTGCACAGTTCAGGTGTATCCAAAGTCATGGACTGCATTGTACTTGCCATTGGACAATGTAGGAATGTGGAATGTGAGATCTGAGAATTGGGCTAGACAGTATTTGGGACAACAATTTTATATTAGAGTGTATTCAACTGCAAATTCATGGAGAGATGAGTACCCAATTCCAACCAATGCACTTCAGTGTGGCAAAGCAGTGGGTCACCACAATTAG 1620 0.4093 MGYSKECCVLLLFLVLLVACVSGEDPYRFYTWNVTYGDIYPLGVKQQGILINGQFPGPQIESVTNDNLIINVFNSLDEPFLISWNGVQQRRNSWQDGVSGTNCPISPGQNFTYILQVKDQIGSYFYFPSLAFHKAAGGYGGFKIASRSMIPVPFDPPSGDFTILAGDWYKRNHTDLRAILDSGSDLPFPDGLIINGHGSNAYTFTVDQGKTYRFRISNVGLTTSINFRIQGHKMKLVEVEGTHSLQNTYDSLDIHLGQTYSVLVTADQPPNDYYIVVTTRFTSQVLNASSILHYSNSAGSVSGPLPGGPTTEIDWSVEQARSIRRNLTASGPRPNPQGSYHYGMINTTRTIRLQNSAPIINGKQRFAVNSVSFIPADTPLKLADYFKIQGVFSLGSISDNPTGGGGYLQTSVMEADFRGFVEVVFENPEDTLQSWHIDGHSFFVVGMNGGQWSAASRLNYNLRDTISRCTVQVYPKSWTALYLPLDNVGMWNVRSENWARQYLGQQFYIRVYSTANSWRDEYPIPTNALQCGKAVGHHN* 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g1423 539 CDD CuRO_3_AAO_like_1 375 497 IPR034275 GO:0005507
Tpr4g1423 539 CDD CuRO_1_AAO_like_1 29 145 IPR034273 GO:0005507
Tpr4g1423 539 Pfam Multicopper oxidase 378 513 IPR011706 GO:0005507|GO:0016491
Tpr4g1423 539 Gene3D - 158 333 IPR008972 -
Tpr4g1423 539 Pfam Multicopper oxidase 160 296 IPR001117 -
Tpr4g1423 539 Gene3D - 27 148 IPR008972 -
Tpr4g1423 539 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 20 - -
Tpr4g1423 539 SUPERFAMILY Cupredoxins 156 334 IPR008972 -
Tpr4g1423 539 SUPERFAMILY Cupredoxins 24 174 IPR008972 -
Tpr4g1423 539 SUPERFAMILY Cupredoxins 344 535 IPR008972 -
Tpr4g1423 539 Pfam Multicopper oxidase 34 147 IPR011707 GO:0005507
Tpr4g1423 539 PANTHER L-ASCORBATE OXIDASE HOMOLOG 8 534 - -
Tpr4g1423 539 PANTHER MULTI-COPPER OXIDASE 8 534 IPR045087 -
Tpr4g1423 539 Gene3D - 343 537 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g1423 Tpr-Chr4 13895317 13900933 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g1423 - - gmx:100791301 980.704
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g1423 4 13895317 13900933 Tpr4g1423 4 13895317 13900933 ECH