Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g1422 ATGCAAATGGTTCAGAGAAAATCGAAGATGATGATGTGGAAGTGGAAGAGAGCAGTGATCCTTCATTTGATGACAGTGTTCACTGTTCAGCGTGCTTTAGTTGTTGGGGACAACAAGAGGGCAGTTTCTCAATGCATATCTGCAAATAAATGGGCTGATGCTTTAGTTATTGCTCACGTGGGTACTACCTCCTTGTGGGAAAGTACATGGGATCAATACCTTAAGAAGAACCGATCACCATACTTAAAGGTTGTTTCAGCGATGGTGAGCAATGATCTCTTAAGCCTTGTGAACACCAGGCCTCTAAAATTCTGGAAAGAAACCCTTGCTCTTTTTGCTCAGAGAGATGAATGGACTATGCTCTGCGACACACTTGCTTCAAAACTCATGGGGGATGGCAATACATTAGCTGCTACTCTTTGTTTTATATGTGCTGGAAATATTGATAAAACATTTGAAATTTGGTCAAGGAGCTGCAACTCTTTGAAATTTCTTCAGGATTTGATGGAAAAAACTATTGTTCTTGCCTTGGCAACTGGGCAGAAGCGCTTTAGTGCCTCTCTGTGCAAGCTTGTTGAGAAATATGCTGAAATCTTAGCAAGTCAAGGGTTGCTGACCACAGCAATGGAGTATCTAAAACTTTTGGGTTCTGAAGAACTTTCGACAGAACTTGTGATATTGAAGGACCTAATTGCACTGTCTACGGAGCCTGGTAAACTTTTTCTTGGATTTCTATATGGCATGGTTTAA 750 0.4107 MQMVQRKSKMMMWKWKRAVILHLMTVFTVQRALVVGDNKRAVSQCISANKWADALVIAHVGTTSLWESTWDQYLKKNRSPYLKVVSAMVSNDLLSLVNTRPLKFWKETLALFAQRDEWTMLCDTLASKLMGDGNTLAATLCFICAGNIDKTFEIWSRSCNSLKFLQDLMEKTIVLALATGQKRFSASLCKLVEKYAEILASQGLLTTAMEYLKLLGSEELSTELVILKDLIALSTEPGKLFLGFLYGMV* 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g1422 249 PANTHER SEC31-RELATED PROTEIN 28 239 IPR040251 GO:0006888
Tpr4g1422 249 PANTHER WD40/YVTN REPEAT-LIKE-CONTAINING DOMAIN, ANCESTRAL COATOMER ELEMENT 1, SEC16/SEC31-RELATED 28 239 - -
Tpr4g1422 249 Gene3D - 25 234 - -
Tpr4g1422 249 Pfam Sec23-binding domain of Sec16 29 149 IPR024298 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g1422 Tpr-Chr4 13881454 13884037 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g1422 K14005 - gmx:100788642 352.058