Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g1411 ATGTCTTGGCTTCTCAGATCAACCAAATCTAAGCTCTTATCTTCCTCTTCTCTTTCTAGAACCTTCTCTTCAATCCCTCGCTCCACCAATCAGATCGGAGCCATCTCTCCCGCCTCCGCCGAACTCTTTCACCGCACCACCGCCACTCTTTCCACCGCGGATGAAAACCCTATCAAGGGGAATTTGATTGGTTTCCCCAAGAATTTGGAGAATAAGCTTGGTGGTGATTCTAATGTGATCAATTCTTTGAGATACCAGGCTCTTGGACTGGACACTAATGTGCTGGCTGGAGTTAGATATGGTACTAACGTTTGTGCTACCAAGAGTCCAATGCTATTGGGAGTCAATGCTTTGATGGCAAGAAACTTTGTGAGAGGTGTGGGTGCTGACGCATTGGGATTGGCTGGTCATAGACGTTTTTTGAGTGACATCCCAAGTAAAGCAAGTGAGACGTCCAGTTTTCGCCCATTATCTCCTCATCTTCCTGTTTATCAGCCCCAACTTTCTTCGACACTCTCAATTTGCAATAGAATTGCTGGAGCTTTCCTATCTGCTGTCGTGTTGCTTTTTTATATCATATACATGAAAATTGGTGTGGTTAGTCTCACCTATGATTCATTCTACCAGTTCGTATTCTATTCATCAAAACTCCACCTACTTGCCGTTGAGATTTCTGCCTTAGCCATGTCCTATCATCTATATAGTGCAATTCGTCATTTATTCCTATGA 729 0.4376 MSWLLRSTKSKLLSSSSLSRTFSSIPRSTNQIGAISPASAELFHRTTATLSTADENPIKGNLIGFPKNLENKLGGDSNVINSLRYQALGLDTNVLAGVRYGTNVCATKSPMLLGVNALMARNFVRGVGADALGLAGHRRFLSDIPSKASETSSFRPLSPHLPVYQPQLSSTLSICNRIAGAFLSAVVLLFYIIYMKIGVVSLTYDSFYQFVFYSSKLHLLAVEISALAMSYHLYSAIRHLFL* 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g1411 242 SUPERFAMILY Fumarate reductase respiratory complex transmembrane subunits 151 241 IPR034804 GO:0016020
Tpr4g1411 242 PANTHER SUCCINATE DEHYDROGENASE CYTOCHROME B560 SUBUNIT 75 241 IPR014314 GO:0000104|GO:0006099|GO:0009055|GO:0045281
Tpr4g1411 242 Pfam Succinate dehydrogenase/Fumarate reductase transmembrane subunit 154 242 IPR000701 GO:0016627
Tpr4g1411 242 PANTHER SUCCINATE DEHYDROGENASE CYTOCHROME B560 SUBUNIT, MITOCHONDRIAL 75 241 - -
Tpr4g1411 242 Gene3D Fumarate reductase/succinate dehydrogenase, transmembrane subunit 144 242 IPR034804 GO:0016020
Tpr4g1411 242 CDD SQR_TypeC_SdhC 155 242 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g1411 K00236 K03885 gmx:100527396 293.508