Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g1407 ATGTCCCAACAATTTAGTAGAAAAAATGGTCACTCTTTCACGCGCCGGCGGATTAACAATCGCGTATCGTTACTCCGACGATGCATACTTCGAGCTCTTAATCGCTTCCTTGCCTGCTCCGGACAGAAGCCCGGTGCTAATGCTACGTATAGCATGTTAACACCACGTTCAGCATTGCCATCTCCGCGTCCTCCGTTGGAATCCGATACCGGATCTTCTCGGCCATCGGTGTTTCGCACAAATGAATTAGACACTGATTTGGTTTCCCTCAAAATTAGCTTGTTGGGTGATTGCCAAATTGGAAAAACCAGCTTTTTGGTGAAATATGTAGGAAATGAAAAAGAGCAGCAGGTAGGAGAACAGAGGAAAGGGTTGAATCAAATGGACAAAACTTTGGTTGTGAGTGGAGCACGTATATCCTATTGTATTTGGGAAGTACAAGGGGATGGAAAATCAGAAGAACAACTTCCAATGGCATGTAAGGATTCAGTTGCAATTTTGATCATGTTTGATCTAACTAGTAGATGCACATTAAATAGTGTTTTGGGATGGTACAAAGAAGCAAGAAAATGGAATCAGACTGCAATACCAGTGTTGATAGGAACAAAGTTTGATGATTTCATTCAGCTCCCTATTGATATGCAATGGACCATCGCTAGTGAGGCAAGAACATATGCAAAGGCATTGAATGCCACTTTGTTCTTTTCAAGTGCAACATACAACATCAATGTGAACAAGATCTTCAAGTTCATCACTGCAAAACTCTTTGATTTACCATGGACAGTTGAAAGAAATCTAAATGTTGGTGAACCCATCATTGATTTCTAA 828 0.4106 MSQQFSRKNGHSFTRRRINNRVSLLRRCILRALNRFLACSGQKPGANATYSMLTPRSALPSPRPPLESDTGSSRPSVFRTNELDTDLVSLKISLLGDCQIGKTSFLVKYVGNEKEQQVGEQRKGLNQMDKTLVVSGARISYCIWEVQGDGKSEEQLPMACKDSVAILIMFDLTSRCTLNSVLGWYKEARKWNQTAIPVLIGTKFDDFIQLPIDMQWTIASEARTYAKALNATLFFSSATYNINVNKIFKFITAKLFDLPWTVERNLNVGEPIIDF* 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g1407 275 Gene3D - 80 266 IPR027417 -
Tpr4g1407 275 SMART rho_sub_3 92 257 IPR001806 GO:0003924|GO:0005525
Tpr4g1407 275 MobiDBLite consensus disorder prediction 55 75 - -
Tpr4g1407 275 PIRSF GTPase_Tem1 2 275 IPR017231 -
Tpr4g1407 275 PRINTS Transforming protein P21 ras signature 90 111 - -
Tpr4g1407 275 PRINTS Transforming protein P21 ras signature 132 154 - -
Tpr4g1407 275 PRINTS Transforming protein P21 ras signature 193 206 - -
Tpr4g1407 275 PRINTS Transforming protein P21 ras signature 233 255 - -
Tpr4g1407 275 ProSiteProfiles small GTPase Rab1 family profile. 84 275 - -
Tpr4g1407 275 Pfam Ras family 91 255 IPR001806 GO:0003924|GO:0005525
Tpr4g1407 275 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 90 268 IPR027417 -
Tpr4g1407 275 SMART rab_sub_5 90 258 - -
Tpr4g1407 275 PANTHER MONOMERIC G-PROTEIN 54 274 - -
Tpr4g1407 275 PANTHER - 54 274 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g1407 Tpr-Chr4 13729406 13733949 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g1407 K07976 - gmx:100792211 424.476
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g1407 4 13729406 13733949 Tpr4g1407 4 13729406 13733949 ECH