Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g1388 ATGCAGTTATTTCAGAAACACACAAAAACACAATTTTTGATTAATTTCATATTAGTAACATCTTCATTTTGTGGCTTTTATGTCCTTGCAACAATATTAATATTAGGTACTTCAAATTCAAAGCTATTATTACATTTACATAATTTTTCATCACAAGATGTGTCTATAATTACAACCACAAACACAACTCTAGATCATATTGTGTTTGGTATTGCTTCAAGCAAAAGTTCATGGACAAAGAGAAAAGATTATGTGAAACTATGGTGGAAAACCAACAATGCAATGAAGGGTTGTGTGTTTCTGGATAGTTTACCTCCAAATGAAGATGACCCTTCTTCTTTTCCGCCACTTTGTGTCTCGAAAGACACTTCGCGGTTTAAATACACTTGTAAAGGTGGACTTCGATCAGCTATACGCGTGGCGCGTGTTGTTGCAGAGACGGTTGCCTTGAATCATTCGGATGTGAAGTGGTATGTATTTGGAGACGATGATACGGTTTTTTTTCCGGAGAATTTAGTGAAGACTCTTTCTAAATATGATCATGAGCTTTGGTATTATATTGGTGCACACTCCGAGATTTATGAGCAAAATCGGATTTTTGGTTTCGGAATGGCTTTTGGTGGTGCTGGTTTTGCTATAAGTTCTTCTCTGGCTAAAGTTTTGGCTAAGGTTTTTGATTCTTGTTTGGAAAGATACCCTCATCTCTATGGAAGTGATGGAAGGGTTTACTCTTGCTTAGCAGAACTTGGTGTTGGATTGACACATGAACCAGGTTTTCATCAGGTTGATTTGACTGGAAACACTTTTGGCCTGTTAGCATCACATCCAGTAACACCGTTATTATCACTACATCATCCAGATTACACAGAACCAATCTTTCCGAACATGACAAGGACAAAAGCCCTCCAACATTTATTTCAAGCAGCAAAAGTTGATTCTCAAAGAATACTACAACAAACAATTTGCTATGACAAAAGGTTTTCATGGACAATTTCAGTTTCATGGGGTTATGCTGTTCAAGTTTTCCCAAATCATATGTTTTTGCCTGAAGTTGTTAATGTTCAAGAAACATTCAAGCAATGGAAAAAGGGAAATATGTTGGCAAAAGCATATACTTTTAATACAAAACCACTTCATTCTGATCCTTGTAAAAGATCTACTATCTTTTATTTTGATAGTGTTTCTTCTGGTAATGATGGTTTCATAAGTAGCTATTATAAGAGATCTTTTCAAAATTGCTCAAAGAATTTGGTGTCTCCAAAGAAAGTTGAAGTTATCAAAGTTGTCACTCATAAGCTAAACCTTGGCATCAAACAGTTGCAGGCTCCAAGAAGGCAATGCTGTGATGTATTGCCTTCTAGTGCTGGTGACCAAATGGAGATTGCTGTTAGAGAATGCAAAGATGAAGAATTGATTTATATGCACTGA 1428 0.3606 MQLFQKHTKTQFLINFILVTSSFCGFYVLATILILGTSNSKLLLHLHNFSSQDVSIITTTNTTLDHIVFGIASSKSSWTKRKDYVKLWWKTNNAMKGCVFLDSLPPNEDDPSSFPPLCVSKDTSRFKYTCKGGLRSAIRVARVVAETVALNHSDVKWYVFGDDDTVFFPENLVKTLSKYDHELWYYIGAHSEIYEQNRIFGFGMAFGGAGFAISSSLAKVLAKVFDSCLERYPHLYGSDGRVYSCLAELGVGLTHEPGFHQVDLTGNTFGLLASHPVTPLLSLHHPDYTEPIFPNMTRTKALQHLFQAAKVDSQRILQQTICYDKRFSWTISVSWGYAVQVFPNHMFLPEVVNVQETFKQWKKGNMLAKAYTFNTKPLHSDPCKRSTIFYFDSVSSGNDGFISSYYKRSFQNCSKNLVSPKKVEVIKVVTHKLNLGIKQLQAPRRQCCDVLPSSAGDQMEIAVRECKDEELIYMH* 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g1388 475 Pfam Protein of unknown function, DUF604 196 448 IPR006740 -
Tpr4g1388 475 Gene3D - 56 323 - -
Tpr4g1388 475 PANTHER TRANSFERRING GLYCOSYL GROUP TRANSFERASE 9 473 - -
Tpr4g1388 475 PANTHER FRINGE-RELATED 9 473 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g1388 Tpr-Chr4 13472968 13476116 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g1388 13 440 Glycosyltransferase AT1G05280 52.064 3.42e-162 465
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g1388 - - gmx:100784602 735.332
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g1388 4 13472968 13476116 Tpr4g1388 4 13472968 13476116 ECH
Tpr4g1388 4 13472968 13476116 Tpr7g4168 7 50787325 50789982 PCT