Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g1385 ATGGATGAACAAGGTTATTGTAATCTTGAAGTGGATGTAAATGGAGAAGAAACTTTCATGGTTGATAAGTCTATTATTACTCAATACTCAAGCAAATTGGCTAAAGTATTTGGAAAATCAAGTGGTTCAAGTGGAAAGCTTAAAGTAATATTCCATGATTTTCCAGGAGGTGCAGAAGGTTTTGAGCTTATGTTAAGATTCTGTTATAACAATGGAAAAGGTAATATAAGTCCTTCGAATTTGTTACTTGCGCGTTGTGCGGCTGAATACATGGAAATGAATGAATCTGTCAAAAATGTTTGTAACTTAATGGACCAAACTGAGAAATCACTTCAAGGGATTAGTTATTGGTCGTGGTCCGAAATTTTGATTGCTTTGAAGCAATGTCGGAATTTAGTAGTTGAAGATTCTTGTGTGATGCTAGAGAAGTGTTTGGATGCTATTGTAGGGAGGTTGGTTTTGGCAAGTGAAGCGAGTCCGTGTCCATCAACTTGTTCTAATGATAGTTCAGGGATTAGGTTTTCGTGCGACTCGAAAAGTACCGAGAGTATAAAGACGAGTTTTACTCGTTCGGCTTGGTGGTTTGAAGATCTATTGTTTTTGACTCCTCAAATGGTTGTCATGTTGGTTAAGTCGATGCTTTCGAGTAAATTGGATCATCATGTTATAAGCAAGTTTCTTCTCTATTATCAGAAGGTGAAATTCGCGAATGCTAGTACCGATGAAAAGTGCAAAATCATTGAAATGGTGATTGATATGCATTATGAATTAAACCAAAGTTCTGTTTCTTTCAAGACATTATTTGGGATTCTTAGGGTTACTTTATGTTTGAACATAAGCAAAAATTGTAGGAACAAGTTGGAGAATATGATTGGATCACAATTGGATCAAGTAACCTTAGACAATTTGCTTGTTCCATCTCCTTATGGAATAAACTACTTATATGATGTGAACCTTGTTCTGAGATTTTTGAAAGCATTTCTGCGGCAAGGAAATGGTGCGGTTGTCGCTCCCATTCGGATGAGGAAAGTTGCTAACTTAATAGATTTGTATATAGCTGAAATAGCCCCTGATCCTTGTTTAAGAACTTCAAAGTTTTTGGCTCTTGCTACAGCTCTTCCAGATTCTGCTAGGGATTCTTGTGATGAACTCTACCATGCTATGGACATGTATCTTGAGGTACATACTCAATTATCACAAGATGAAAGGATAAAAATATGCTGTGGTTTAAATTATGAGAAACTTTCACCTCAAGCATGCTTACACCTTTCAAAGAACACAAAATTTCCATCAAAATCAGCAGTTCAAGCTCTCATATCTCAACAATCTAAGCTCAAAAATCTACTCAATGCTACTACTCCTATTTCAACTCCATACAATGATTCATTGTGTGGTTCAAGTGGTTCTGCTCAAAAGGGAAAGAAAGAAAAAAGCAGTGAACAAGTTGTTTTATATGCTGGAAATTTTGATATTCCACCTGATAATGAGAAACTTAAAGCACATTTGCAAGGAATGCAATGTAGGGTTATGGAGTTAGAGAAAATTTGTAGGAAAATGCAAACTCAAATGGCAAAGATGACAAAGTCAAAAGCATCTTCTCATAGTTATGGTAAATCTTTGCCAAAGCTTTGTTCATGA 1638 0.359 MDEQGYCNLEVDVNGEETFMVDKSIITQYSSKLAKVFGKSSGSSGKLKVIFHDFPGGAEGFELMLRFCYNNGKGNISPSNLLLARCAAEYMEMNESVKNVCNLMDQTEKSLQGISYWSWSEILIALKQCRNLVVEDSCVMLEKCLDAIVGRLVLASEASPCPSTCSNDSSGIRFSCDSKSTESIKTSFTRSAWWFEDLLFLTPQMVVMLVKSMLSSKLDHHVISKFLLYYQKVKFANASTDEKCKIIEMVIDMHYELNQSSVSFKTLFGILRVTLCLNISKNCRNKLENMIGSQLDQVTLDNLLVPSPYGINYLYDVNLVLRFLKAFLRQGNGAVVAPIRMRKVANLIDLYIAEIAPDPCLRTSKFLALATALPDSARDSCDELYHAMDMYLEVHTQLSQDERIKICCGLNYEKLSPQACLHLSKNTKFPSKSAVQALISQQSKLKNLLNATTPISTPYNDSLCGSSGSAQKGKKEKSSEQVVLYAGNFDIPPDNEKLKAHLQGMQCRVMELEKICRKMQTQMAKMTKSKASSHSYGKSLPKLCS* 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g1385 545 Coils Coil 495 522 - -
Tpr4g1385 545 SMART BTB_4 7 108 IPR000210 GO:0005515
Tpr4g1385 545 ProSiteProfiles NPH3 domain profile. 192 444 IPR027356 -
Tpr4g1385 545 ProSiteProfiles BTB domain profile. 7 71 IPR000210 GO:0005515
Tpr4g1385 545 Gene3D Potassium Channel Kv1.1; Chain A 1 117 IPR011333 -
Tpr4g1385 545 Pfam NPH3 family 193 420 IPR027356 -
Tpr4g1385 545 SUPERFAMILY POZ domain 5 104 IPR011333 -
Tpr4g1385 545 MobiDBLite consensus disorder prediction 526 545 - -
Tpr4g1385 545 PANTHER OS12G0117600 PROTEIN 13 545 IPR043454 -
Tpr4g1385 545 PANTHER BTB/POZ DOMAIN-CONTAINING PROTEIN 13 545 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g1385 Tpr-Chr4 13418123 13422295 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g1385 19 525 EF-hand Containing Proteins AT3G44820 27.145 1.10e-54 193
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g1385 - - gmx:100784792 851.277