Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g1376 ATGCCTGAAGAGGCTCCAAAACAAAACTCTTCCAACAAAAAAAATGTTGAAAATTATGATGATATTAGTAGTACTATTAATAACAACAATAAGAAAGCATTGAAATACATTGAAGATGTTACCATTAACACCGATGAAATTCAAGAAAAAGTACTAGCTGAAATTCTTTCTTCTAATGCTCTTGTTGAGTATCTTCAACGCCATAGGCTTAATGGGAGCACAGATAGAAAAACTTTCAAAAGGGTTTTGCCTGTGGTGACTTATGAAGATTTGAAGGTGGATATTGATCGTATAGCTAATGGTGATAAATCCCAAATTTTATGCTCTAAACCTATATCTGAGTTCCTTACTAGCTCTGGAACATCAGGAGGGGAGAGAAAATTGATGCCAACTATAGAAGAAGAGTTAGAGAGAAGATCATTACTTTACAGCCTTTTAATGCCAGTGATGAATCAATTTGTTCCCAATTTAGAGAAAGGCAAAGGAATGTACTTTTTGTTCACAAAATCAGAAGCAAAAACACCAGGTGGATTACTTGCACGTCCTGTTTTAACAAGTTACTACAAAAGCACACACTTTAAGAACAAATCACATGAAAATGATCCTTATACAAATTACACTAGTCCAATTCAAACCATTCTTTGTCTAGATTCTTATCAAAGCATGTATTCTCAAATCCTTTGTGGTCTTTACCAAAATGAACAAGTTCTTCGTGTCGGTGCTGTTTTCGCTTCCGGTTTCATTCGTGCGGTTAAGTTTCTCGAAAAACATTGGCTTCGTTTGTGTAATGACATAAGAAAGGGTACCATAGACGATGAAATTACCGACCTGGATGTACGTGAGGCGGTGATGAAAATACTTAAACCAAATCCGAAGCTTGCGGATTTCGTAGAATCGGAATGCAAGAAAGAGTCATGGAAAGGGATCATTACTAGGTTATGGCCTAATACAAAATATGTTGATGTTATTGTTACTGGAACAATGTCTCAATATATTCCAATTTTGGATTACTATAGTAATGGTCTTCCTCTTGTGTGTACTATGTATGCATCTTCTGAGTGTTACTTTGGCCTTAACTTAAATCCTTTGTGTGATCCAAGTGAAGTAGCTTATACACTTATTCCTACCATGGCCTACTTTGAGTTCTTGCCTCTTAACAACATTGATGGAAATGCTGATTCAATTTCTGCCTCAGAGCAAGAACATTTAGTTGATCTTGTAGATGTTGAGTTGGGTCAAGAATATGAGCTTGTGGTTACCACTTATGCAGGACTTTATAGGTACAGAGTTGGTGACATACTCCGCGTAGCAGGATTCAAGAACAAGGCACCTCAATTCAACTTCATATGCAGAAAGAACGTCGTTCTAAGCATCGATTCAGACAAAACCGATGAAGTTGAGCTACAAAACGCTGTAAAGAATGGATCAAACCATCTTTCAAACTACAATGCATCACTAACAGATTACACAAGTTCTGCCGACACATCCACAATTCCAGGCCACTACATACTCTACTGGGAAATCACCAAGAACAATCAAAACCCAATTCCAAATTCTGTTTTTGAGGAATGTTGTTTTACAGTTGAAGATTCTCTCAACAGCGTTTATCGTCAAGGAAGAATAACAGAATCAATTGGGCCATTGGAAATTAAGGTTGTTGAGAATGGAACATTTGATAAGGTTATGGATTTTGCTCTTAGCCAAGGTGCTTCTATAAATCAATATAAGACACCTCGTTGTGTGAAATATGGTCCTATATTAGAGCTTCTTAACTCTAAGACAGTTTCTAGCTTCTTTAGTCCAAAATGTCCACAATGGGTTCCTGGTCATAAGAAGTGGTGCATCCTTGACTGA 1854 0.3695 MPEEAPKQNSSNKKNVENYDDISSTINNNNKKALKYIEDVTINTDEIQEKVLAEILSSNALVEYLQRHRLNGSTDRKTFKRVLPVVTYEDLKVDIDRIANGDKSQILCSKPISEFLTSSGTSGGERKLMPTIEEELERRSLLYSLLMPVMNQFVPNLEKGKGMYFLFTKSEAKTPGGLLARPVLTSYYKSTHFKNKSHENDPYTNYTSPIQTILCLDSYQSMYSQILCGLYQNEQVLRVGAVFASGFIRAVKFLEKHWLRLCNDIRKGTIDDEITDLDVREAVMKILKPNPKLADFVESECKKESWKGIITRLWPNTKYVDVIVTGTMSQYIPILDYYSNGLPLVCTMYASSECYFGLNLNPLCDPSEVAYTLIPTMAYFEFLPLNNIDGNADSISASEQEHLVDLVDVELGQEYELVVTTYAGLYRYRVGDILRVAGFKNKAPQFNFICRKNVVLSIDSDKTDEVELQNAVKNGSNHLSNYNASLTDYTSSADTSTIPGHYILYWEITKNNQNPIPNSVFEECCFTVEDSLNSVYRQGRITESIGPLEIKVVENGTFDKVMDFALSQGASINQYKTPRCVKYGPILELLNSKTVSSFFSPKCPQWVPGHKKWCILD* 618
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g1376 617 Pfam GH3 auxin-responsive promoter 37 582 IPR004993 -
Tpr4g1376 617 MobiDBLite consensus disorder prediction 1 20 - -
Tpr4g1376 617 PANTHER GH3 DOMAIN-CONTAINING PROTEIN 23 613 IPR004993 -
Tpr4g1376 617 PANTHER INDOLE-3-ACETIC ACID-AMIDO SYNTHETASE 23 613 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g1376 Tpr-Chr4 13305056 13309330 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g1376 22 600 EF-hand Containing Proteins AT1G23160 49.915 0.0 579
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g1376 K14487 - gmx:100819676 1029.24
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g1376 4 13305056 13309330 Tpr4g1376 4 13305056 13309330 ECH