Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g1342 ATGAGGAAAAATGTTGGTTCTTATTCAGGAAGGATGTTTAGTGACAAGAAATGGATTATACCATTTTTTGCAAGTTTGTTGGTATCTGTGAGTTTAGTTTTGACAGCTATTCTTGGATCGTTTAGTTCTGCTGGTGGGGGCGAGGAGTTGCCGTTGGTTGATGTCATTTCATTTAAGGGATCAGAGGATTCCGGTGGATTATTTGTGGAGTCGGATTTGGAAAGGTCTATAAATGCTAGCGTGGTTGTGAAAATGGAGGCGCCTAAGTTTGCATATCTTATTTCAGGCACCAAGGGTGATAGTCATAGGATGATGAGGACGTTAGAGGCGATTTATCACCCAAGAAATCAGTATGTTTTGCATTTGGATCTTGAGGCGCCGCCTCGAGAAAGGTTGGAGTTGGCAAATGCAGTGAAAGCTGATCCGATATTTAGAGAAGTGGAGAATGTGCGTGTTATGTCTCAATCCAATTTGGTTACCTATAAGGGTCCTACGATGATTGCTTGTACTCTTCAAGCTATTGCAATACTACTGAAGGAGAGCTCAGAGTGGGACTGGTTTATAAACCTTAGTGCCTCAGATTATCCTCTTGTGACACAAGATGATATGCTTCATGTTTTCTCTAATCTGTCAAGAGATCTCAATTTCATTGAACATACACGCATTACCGGTTGGAAATTGAACCAAAGAGCAAGGCCCATCATTATTGATCCTGCCCTTTACTTATCGAAGAAATCTGATTTAGCATTGACTTCTCAAAGAAGAACACTACCCACACCTTTTAAATTGTTCACCGGTTCAGCTTGGGTTGTACTAACACGGTCTTTTGTGGAGTACTGTATATGGGGATGGGATAACTTTCCACGGACTATGCTTATGTATTATACAAATTTTGTCTCTTCGCCAGAGGGATATTTTCACACTGTCATTTGTAACACTCAGAAATTTCGGCACACAGCAATAAGCCACGATCTTCACTATATTGCTTGGGACAGTCCACCAAAGCAACATCCCATCTCTTTAACAACGAAGGACTATGACAAAATGGCCAAGAGCAATGCTCCCTTTGCCCGAAAGTTCCCCAAGGATGATCCAGTCCTAGACAAGATTGACAAAGAACTTTTGGGTCGGACGCATAGATTTTCACCAGGGGGGTGGTGTATTGGGACATCAGATGGTGGAGCAGACCCGTGTTCTTTGCGCGGTAACGATACAGTGTTTAGGCCAGGACCTGGTGCCGAGAAGCTACACAAGCTGCTTCAGGTGCTGTTATCTGAAGAATTTATAAGCAAACAGTGTTTGTGA 1305 0.4261 MRKNVGSYSGRMFSDKKWIIPFFASLLVSVSLVLTAILGSFSSAGGGEELPLVDVISFKGSEDSGGLFVESDLERSINASVVVKMEAPKFAYLISGTKGDSHRMMRTLEAIYHPRNQYVLHLDLEAPPRERLELANAVKADPIFREVENVRVMSQSNLVTYKGPTMIACTLQAIAILLKESSEWDWFINLSASDYPLVTQDDMLHVFSNLSRDLNFIEHTRITGWKLNQRARPIIIDPALYLSKKSDLALTSQRRTLPTPFKLFTGSAWVVLTRSFVEYCIWGWDNFPRTMLMYYTNFVSSPEGYFHTVICNTQKFRHTAISHDLHYIAWDSPPKQHPISLTTKDYDKMAKSNAPFARKFPKDDPVLDKIDKELLGRTHRFSPGGWCIGTSDGGADPCSLRGNDTVFRPGPGAEKLHKLLQVLLSEEFISKQCL* 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g1342 434 Pfam Core-2/I-Branching enzyme 90 349 IPR003406 GO:0016020|GO:0016757
Tpr4g1342 434 PANTHER GLYCOSYLTRANSFERASE 9 429 IPR044610 GO:0015020
Tpr4g1342 434 PANTHER BNACNNG43180D PROTEIN 9 429 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g1342 Tpr-Chr4 12971198 12976286 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g1342 77 433 Glycosyltransferase AT1G03520 76.190 0.0 606
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g1342 - - gmx:100795146 773.852