Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g1336 ATGGAACAACCAAATATCAACAATGGTAGTGGTTGTTTTGACTATGAAAAGATTATTACTTGGTTTGAAGATGTATCTAAGAACACATCCTCTGTTCAAACACAGGTATTAAGCAATATTCTCAAACAAAATCATGGTGTGGAATATCTCAAAAAATGGTTAGGGGCTTACAATGTTTTGGAAATGGAACCATGTGCATTGGAATCCCTTTTCACTTCTTTGGTTCCTATTGCTTCTCATGCTGATTTTGAACCATTTATTCAAAGGATTTCTGATGGGGATTCTACTCCTTTACTCACTCAACAACCTATAACCACTCTTTCCTTAAGTTCTGGAACCACTGAAGGAAGGCAGAAATTCGTACCCTTTACCAGACATAGTGCTCAAACCACGCTTCAAATATTCACTTTATCAGCTGCCTATAGATCAAGGGTTTACCCCATAAGGGAAGGAGGAAGGGTTCTTGAATTCATATATGGAAGCAATTGTTTCAAAACAAAAGGAAATTTAACAGTAGGAACAGCCACAACACATTGTTATGCAAGTGAAGAATTCAAAACCAAACATCACAAAACTAAATCATTTAGTTGTAGCCCTCAAGAAGTGATTTTCAATGGAGACTATAAACAATCAACTTATTGCCATCTCCTTCTAGGCCTCTTCTATTCTCAACAAGTAGAATCTATCACCTCAGCTTTTGTCTACACCATGGTACAAGCATTCACTACATTTGAAGAAAATTGGAGAGAAATTATTAATGACATTAAAAATGGTACTCTAAGTTCAAGAATTAAGTCACCAAAATTAAGAGAAGCTATTTTGGACATAATTAATTCAAAAAGTGGTCCAAACATAAAGTTGGCTTCAAAATTAGAAGATTATTGTGAGGAGTTAGAAAAAGTTGATTGGTTTGGTTTGATACCAAAGATATGGCCAAATGTGAAGTACTTGTATTCAATAATGACAGGTTCAATGCAACCATATTTGAAAAAACTTAGACATTATGCAAATGGGTTGCCTTTAATAAGTGCTGATTATGGATCAACTGAAAGCTGGATTGGAGTTAATGTTGATCCTTGTTTGGATCCAGAAGAAGTAACTTTTGCTGTTGTGCCAACTTTCTCTTATTTTGAGTTCATACCTCTTCATAGAAATAAACAAGATTGCAGTGATTTTGTTGAAGATAAGCCAATTCCATTGTCAAAGGTTATTGTTGGACAACAATATGAAATTGTTCTCACAACTTTTACAGGGTTGTACAGATGCAGGCTAGGAGATGTGGTAGAAGTGGCAGGATTTCACAATGGGACCCCAAAATTGAACTTCATATGCAGAAGAAAATTAATCCTAACAGTAAACATAGACAAAAATACAGAGAAGGACCTACAATTAGTGGTAGAGAGAGGGTCACACATTCTAAATAAAGCCAAAGCTGAAATTGTTGATTTCACTAGTTATGCTGATGTAACAAACCAACCTGGTCACTATGTTATTTACTGGGAAATTAAAGGTGAAGTTGAGGACAATGTACTTGATGCTTGTTGTAGAGAAATGGACCTATCTTTTGCTGATCATGGATATGTTGTTTCAAGAAAAACCAATTCAATTGGGCCACTTGAACTTTGCATTTTGGAAAGTGGAGCTTTTAAGAAGATTTTGGATAATTTCATTGCCAATGGAGTTGCTTTGAACCAATTTAAGACTCCTAGGTGCACTAACAATCATGTCTTGCTCAAAATTCTTGACAATTGTACCACTAAAAGGTTTCTAAGCACAGCTTATAGTTTAGATTAA 1794 0.3512 MEQPNINNGSGCFDYEKIITWFEDVSKNTSSVQTQVLSNILKQNHGVEYLKKWLGAYNVLEMEPCALESLFTSLVPIASHADFEPFIQRISDGDSTPLLTQQPITTLSLSSGTTEGRQKFVPFTRHSAQTTLQIFTLSAAYRSRVYPIREGGRVLEFIYGSNCFKTKGNLTVGTATTHCYASEEFKTKHHKTKSFSCSPQEVIFNGDYKQSTYCHLLLGLFYSQQVESITSAFVYTMVQAFTTFEENWREIINDIKNGTLSSRIKSPKLREAILDIINSKSGPNIKLASKLEDYCEELEKVDWFGLIPKIWPNVKYLYSIMTGSMQPYLKKLRHYANGLPLISADYGSTESWIGVNVDPCLDPEEVTFAVVPTFSYFEFIPLHRNKQDCSDFVEDKPIPLSKVIVGQQYEIVLTTFTGLYRCRLGDVVEVAGFHNGTPKLNFICRRKLILTVNIDKNTEKDLQLVVERGSHILNKAKAEIVDFTSYADVTNQPGHYVIYWEIKGEVEDNVLDACCREMDLSFADHGYVVSRKTNSIGPLELCILESGAFKKILDNFIANGVALNQFKTPRCTNNHVLLKILDNCTTKRFLSTAYSLD* 598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g1336 597 PANTHER INDOLE-3-ACETIC ACID-AMIDO SYNTHETASE GH3.10 15 594 - -
Tpr4g1336 597 Pfam GH3 auxin-responsive promoter 21 574 IPR004993 -
Tpr4g1336 597 PANTHER GH3 DOMAIN-CONTAINING PROTEIN 15 594 IPR004993 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g1336 Tpr-Chr4 12910188 12918077 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g1336 22 592 EF-hand Containing Proteins AT1G23160 34.017 5.07e-115 353
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g1336 K14487 - gmx:100792358 980.704