Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g1333 ATGGAATCCTCAAATTGGATTCTCATCAAACATGTATTCATTTTCCTCTTTTTCTTCCTTAATCCTTCAATGTCCACAACTTTCTCTTCCACACCTAAGTCACCTTTGAACCTTGTTGTTTCACACACTAAAGCCATACACCAAAATTATACTGCATTATCAGATTTTAGATTGATAAATAGAAGAATTTTGACGGATTGTTCTAGTTCAAATCCTTATGTTAAAGTCAATATCAGCTCAAATTCTGGCTTGTCGGATGACGAATTTGTCACGGTTACGGTCACCGGAGTTTCGAAACCGAGAGATGGTGATTGGGTGGCTATGATTTCACCTTCAAATTCCAATGCTGAAACTTGTCTTTTGAATGGAATATATTATCTACAAACTGGTGATACTGCAAAACTTCCTCTGCTTTGCCATTACCCTGTCAAGGCACAATACTTGAAAAACGATCCAGATTACTTGAGCTGCAAAAACAAAGAATGCAAGAAAGAGCAAAATGGGAAATGTAGTGTGACAACTTGTACTGGTTCATTAGAGTTTCATGTGATCAACATTAGAAGTGACATAGAATTTGTGTTATTTTCTGGTGGATTTCTTAATCCATGTCTTGTTGGAAGATCCACTCCTGTTGGTTTTACTAATCCTAAGAAGCCACTTTATGGACATCTCTCAAGCATAGATTCAACTTCCACATCAATGAGATTGACATGGGTTAGTGGAGACAAGGAACCTCAGCAAGTCCGATATGGAGATGGGAAAACAATTACTTCAGCAGTCACTACTTTTTCACAAGCTGATATGTGCAGTTCAGCACTACCTAGTCCTGCTAAGGATTTTGGATGGCATGACCCTGGATACATCCATTCAGCACTTATGACAGGACTTAAGCCATCAACTGCCTACTCCTACAGATATGGAAGTAACTCGGTTGATTGGAGTGAACAAATCAAATTTTCAACTCCGCCTGCTGGAGGATCAGATGAGCTCAAATTCATTTCATTTGGTGATATGGGCAAGACCCCTCTTGATGCTTCAGAAGAACACTATATTCAGCCTGGAGCTCTATCAGTTATCAAAGCTATAGCTAATGAAGTGAGCACTAACAATGTAAACTCAGTATTTCACATTGGAGACATAAGCTATGCAACTGGTTTTCTAGCAGAATGGGATTTCTTCTTGCACCTTATTAATCCAGTAGCTTCAAGAGTTTCTTACATGACAGCAATTGGGAACCATGAGAGGGATTATATAGATTCTGGTTCAGTTTATATTACTCCTGACTCGGGCGGTGAATGTGGAGTACCTTATGAAACATACTTTCCGATGCCAACTTCAGCAAAGGATAAGCCTTGGTACTCTATTGAACAAGCAAGTGTTCATTTCACAGTAATATCAACTGAGCATGACTGGTCAATAAATTCTGAGCAGTATGCATGGATGAAAAAGGACATGGCATCAGTTAATAGACAACATACTCCTTGGCTAATCTTCATGGGACATAGACCAATGTACACTTCCAACAATGGATTTTCATCTAAAGATAAAAACTTTATCAATGCTGTGGAGCCTTTGTTGTTAGCGAATAAGGTTGACTTGGTCCTTTTTGGCCATGTGCATAATTATGAGAGAACTTGTTCTGTTTATCAGAATAAATGCAAAGCCATGCCTATAAAAGATAAAAATGGTGTAGACATATATGATAACAAAAATTATAGTGCTCCTGTACATGCTGTCATCGGCATGGCCGGTTTCTCCTTAGACAAAGTCTCAAACAATGCTGATAGCTGGAGTCTTAAAAGAATTTCTGAGTTTGGTTATTTAAGAGCACATGCTACTAGGAATGATTTAAACTTAGAGTTTGTGACATCAGATACAAAAGAAGTTAAGGATAGTTTCCGCATTACAAAGTGA 1914 0.3819 MESSNWILIKHVFIFLFFFLNPSMSTTFSSTPKSPLNLVVSHTKAIHQNYTALSDFRLINRRILTDCSSSNPYVKVNISSNSGLSDDEFVTVTVTGVSKPRDGDWVAMISPSNSNAETCLLNGIYYLQTGDTAKLPLLCHYPVKAQYLKNDPDYLSCKNKECKKEQNGKCSVTTCTGSLEFHVINIRSDIEFVLFSGGFLNPCLVGRSTPVGFTNPKKPLYGHLSSIDSTSTSMRLTWVSGDKEPQQVRYGDGKTITSAVTTFSQADMCSSALPSPAKDFGWHDPGYIHSALMTGLKPSTAYSYRYGSNSVDWSEQIKFSTPPAGGSDELKFISFGDMGKTPLDASEEHYIQPGALSVIKAIANEVSTNNVNSVFHIGDISYATGFLAEWDFFLHLINPVASRVSYMTAIGNHERDYIDSGSVYITPDSGGECGVPYETYFPMPTSAKDKPWYSIEQASVHFTVISTEHDWSINSEQYAWMKKDMASVNRQHTPWLIFMGHRPMYTSNNGFSSKDKNFINAVEPLLLANKVDLVLFGHVHNYERTCSVYQNKCKAMPIKDKNGVDIYDNKNYSAPVHAVIGMAGFSLDKVSNNADSWSLKRISEFGYLRAHATRNDLNLEFVTSDTKEVKDSFRITK* 638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g1333 637 Gene3D - 326 637 IPR029052 -
Tpr4g1333 637 CDD MPP_PAPs 329 637 IPR041792 -
Tpr4g1333 637 Pfam Calcineurin-like phosphoesterase 331 542 IPR004843 GO:0016787
Tpr4g1333 637 PANTHER PURPLE ACID PHOSPHATASE-RELATED 40 637 - -
Tpr4g1333 637 SUPERFAMILY Metallo-dependent phosphatases 330 629 IPR029052 -
Tpr4g1333 637 Pfam Iron/zinc purple acid phosphatase-like protein C 574 632 IPR025733 -
Tpr4g1333 637 Pfam Fn3-like domain from Purple Acid Phosphatase 84 215 IPR040974 -
Tpr4g1333 637 Gene3D - 219 325 - -
Tpr4g1333 637 Pfam Purple acid Phosphatase, N-terminal domain 223 321 IPR015914 GO:0003993|GO:0046872
Tpr4g1333 637 SUPERFAMILY Purple acid phosphatase, N-terminal domain 208 323 IPR008963 GO:0003993|GO:0046872
Tpr4g1333 637 PANTHER PURPLE ACID PHOSPHATASE 40 637 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g1333 Tpr-Chr4 12892648 12900946 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g1333 76 635 Miscellaneous Gene Families AT2G03450 30.645 4.71e-71 240
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g1333 K22390 - gmx:100802505 1100.89