Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g1301 ATGTTCAAAGAAGGGACTTGTAACGTGTGCTCAGCTCCTTGTTCATCTTGCATGCATCTTAATCAAGCTATTATGGGGTCGAAGGCTGAAGAATACTCTGATGAAAACTGTCGCTTAGTGGAGGACAAACGTTATTCGACAGACGAGGGTGATGAATCTTATGTTAGGAGCAGAACTTGTGAAAGATTGAAGCATTCTGGCAGTGAAACCAGTAACATGCCCAGTATTTTCTCCAGTCATGATTCTTTATCTGAAAATACCAAGACTAAACAGGCCTTTTCAGAAAAGTGTCAGGATTCTAAGTGTTTAGAAGGTCTTGATGATAACATTAATTGTATCAATAGACCCGGTAATACTAATTTAGTGAGTTGTGGTAATCAAATAAATTCAGACAAAATAAATATATCTTCTAGTTCGGCTTCAGTTAGTCTGTTTGGGGAACAAGAGTCTCGAAATGCGCAATCTGTTGATATATCTGGTTCATCTGAGATTCTCTCTAAATATGCAGATGTTCCAGAAAAATTGTCAGAATGCGGTATAGAAAATGTTGATTCATCATTGACCAAAGAGAGAGAACCTATTATTGTTTCTGGTGAAAAATCTCTTCCATATAAGGATGAACTTCTTAGTGATACAGCCAAAGTGTCACAAAAAATGTATCCAAAGTCAGAAGCTGATGCTGACAATGATGTTAGTGTTGCTGAAGATGGGGAACATAAACGTTCAGCCCATGATGGACTGCATGAGAAGGTTGTGGAACGGGTTAACTCGCTTGGGATATCTGTACCTCAACCAGAAGATGAGAGTGATGAATCAGATGTTATTGAGCATGATGTAAAAGTATGTGACATCTGTGGAGATGCTGGTCAGGAGAAAGACCTTGCCATATGTAGTAGGTGCATTGATGGTGCAGAGCACACATACTGCATGCGGGAAAAGCCTCAAGAGTTTCCTAAAGGGGACTGGTTATGTGAGGAATGCCAATGTGCTGAGGAGACTGCTGCCAATCAAAGATTGGATGTTGAAGGAAAAAATAGTCATAAAGTTGGTTCCAGTTCTCAAATATCTGGCAAAAGGTCTTCTGAAATCATGGAAGTAGCTGAAGTAGCAAAGAGGCGAGCCCTCGAATCAAGCACAGGATCACCGAAGGCATCAAGCCCTAGGAGATTAGTTCCACTGTCACGAGAGTCTTCATTCAAGAACTTAGACAATGGAATGGTGAAACCTGGTCAAACTTCAAGGAGAATGGGTTCATTGTTGAAGTGTAGTTCATTCAACAACTTCAATTCCAAATCAAGAGGCAAACTTGATGATGATGTTCGTCAAAAGCAGAAAGTGGGTGGTGGTGAACATGTTTCTAAGAACATGGAGATACCTGGTGGGACAGTAAGAAAATCAATGTCATTCAAATCGTCAAATTTGGGTCGTGCTACTGTATCAAAAGTTAAAATGCTTTCTTCCAAGTCTGGAACTTCTCAGGATTTGAAAGGATCAAGCCTTGCAAAAGAATCAGCTGTTTTTGACAGGAAATCTCTGTCTAAGATTGATCGGCCTGTAGTCTGTTCCACAATGGCTAGTTCTGTCATTTCCACATCTAAGCATGATCAGGAGTTTAAAGTTAACCATGTTGGAAAATCAAGTTCATTATCAAAGCCTGTGAATAAAATAAACAACAAAATCCCAGAACCTCAAGCTATTTCAGGGAGAACGTCAACCAGTGTGTATGAAACTCAACAGGATGGGCTGCCTCGATTACGAGAAACAGCAAATCAGGTTGACAAAACAAAAGATAGTTATACTCATCGTATGAGGTCAGGTACTAGTGCTTCAACACCTCCGTTCTGTCATAAATGTAAAGATCATGGCCATGCTACAGAATGTTGCACAGTTGGTGGAACACATGAATTTGGTGCTGACAGATTGGTTACTTCCACAAGTAGTTCAAAAGAGTTGCATAAAGGTAGTAGATTGAAAGCTGCACTCCAGGCAGCTATGCTTAAAAGGCCTGAAATACACAAGAAGAAATATCTACATGATCAGTCTGCTACATCAGACACAGTCTTGAAATGTAAAGTCAGCTCTCAAGACCAAGTGGAGGTCTCTGCTTATAACACACTGAAAAAAAGTATTTCTGTTGAAGAAACCAATGTGAAGCATGAAAGGCAGAATTCTACATTTGAAACGTCCAAATGTTTGTCTGTCAATGATTTGAATCACATTAAAACTGATTTGTGCTCTCAACTGAAGAATTCGGATTCTATTAGTCCTTCTGAAAAGCCCGCAGTGAGAGACTTGCCTAATCATGTTTTGGCGATCTCAAGTGTTACTTCAGAGATGTCAGCCGTTCCAGAGTACAAATACATCTGGCAGGGTGTCTTTGAAGTGAGTAGAAGTGGAAAGTCTCCCAACCTTTATACCGGAATTCAAGCACATTTATCCTCATGCGCTTCCCCAAAGGTTCTTGATGTTGTGAACAAGATTTTACCCGAAATTTCCCTGCATGAAGTTTCTCGCTTGAGCACATGGCCTTCACATTTTCGTCAATGCGGTGCTAAAGAAGATAATATTGCTCTTTACTTCTTTGCCAAAGACATTGAAAGTTATGAGAGACACTACAAGAGTCTATTGGATCACATGATTAGGCATGATTTAGCACTCAAAGGGTTTATTGATGGTGTCGAACTTCTCATATTTGCTTCCAATCAGCTTCCTGAAAATTCACAGCGTTGGAATATGTTATTTTTCTTATGGGGAATATTTAAAGGGAGGAGGGTTAATCATTCAGATTCTGTAAAAAATATTGTTTTACCAAGTTTGAACGTGGCGGTGCCAATTGAGAAGGATTTTCCGACTGCTGTCATGACCTTGTCTGATACTCGCTGTTCACCAGTGCGCATCAATGAAGAATCAATAGCTTGTGGTAAAGATTGCAGTGAACTTCCAGCCACTTCCATTGACCAAGGTCATATTATGCTAAGTAAGGATTTTGATATAAAAGATACTATTGTTGACCAGACACATTTGGGTTCACAAGTAAACTTTGATAGGCAAGATAGTAGAATCAACAACACCAAGTCTTCGTCAAGGATTTCAACAAACGTTATACAACCATGTCGAGAAATGAATACCATTGATTCGTCCCTGAAAGAGAAAGGTAGTTTGTCAGAGCATGGACTGCACAGAGAGTCTAAATCTCCTGAAGAGGCGGGAACAATTGTAAGGGCTATGATTGTGGAAACAAAACCTGATTATGGTATTTCTGTCAAACAAGAGAACTCCCTGTCTTCAAGGATTCCTTTTCTTGACAATCAAGAGATACTCACTGCAAACAGCACCCTGAAAGATAAAATTTCAGAGAGAACAAACAATGATGAAAATCAACGAAGGCCTAAAAGGAAAGAGAGAGAAGATGATCTCAATATTAATGTGGAAGCAACATTTCAGGGAGATCTGGCCCTAGAAGCAGTCAACTGTCAGCTGCCTAATGATATAAAAGTTGCGCATATAGACCATTCTAACACAGTTATGGAGGCTCCTGCAGCTAGTTGTCAGGAAATGCCTCGGACTAAGATGAATCGAAAGTTGGAAGATACAGACAGTTCTAGCAAGCTGCAGTCAGGTTTCAGTGGAGTCTATGGGTGTCACAATTTTGTAGCTAGGGATTCTCTTACTGGAAGTTCTACATCACTTGTAAATGATTTTGGTTCCTCTTCTTCAGTTGAAGACAAAGGATGCAAAGAATCTTGTGATGAGAAAATCATCCATGAGGACCTCGGAACGATGGAAAAAACCTTCTTCCCTATTGATAGACACAATACAACTGACTCGCGATTGGTGCTGAATAGCATGTCAATGAAAGGGTCTCATGAGTGCCGTGAGCAATTTGAAGTTGGGATACCGAGTCTCGAGCTTGCTTTGGGGGGTGAAATTAAACAGTCAAAGAACGGTACACTTCCTTTCCTTGCTGGGCAAGCTGACAAGAAAAATAACCAGGAAAAGACTCCAGATTGTTTGGAAGCTGAGCAAGAGGATGATGACAGTCTTGCTGCATCTCTTTCCCTGTCTCTATCTTTCCCATCTTCAAACAAGGAAACCACAATACCTGCTTCAAAAGATGAGCATCACATGAATTCTTCATTGCTCCTTTTTGGGAGATTCACTGACAAATAA 4170 0.4019 MFKEGTCNVCSAPCSSCMHLNQAIMGSKAEEYSDENCRLVEDKRYSTDEGDESYVRSRTCERLKHSGSETSNMPSIFSSHDSLSENTKTKQAFSEKCQDSKCLEGLDDNINCINRPGNTNLVSCGNQINSDKINISSSSASVSLFGEQESRNAQSVDISGSSEILSKYADVPEKLSECGIENVDSSLTKEREPIIVSGEKSLPYKDELLSDTAKVSQKMYPKSEADADNDVSVAEDGEHKRSAHDGLHEKVVERVNSLGISVPQPEDESDESDVIEHDVKVCDICGDAGQEKDLAICSRCIDGAEHTYCMREKPQEFPKGDWLCEECQCAEETAANQRLDVEGKNSHKVGSSSQISGKRSSEIMEVAEVAKRRALESSTGSPKASSPRRLVPLSRESSFKNLDNGMVKPGQTSRRMGSLLKCSSFNNFNSKSRGKLDDDVRQKQKVGGGEHVSKNMEIPGGTVRKSMSFKSSNLGRATVSKVKMLSSKSGTSQDLKGSSLAKESAVFDRKSLSKIDRPVVCSTMASSVISTSKHDQEFKVNHVGKSSSLSKPVNKINNKIPEPQAISGRTSTSVYETQQDGLPRLRETANQVDKTKDSYTHRMRSGTSASTPPFCHKCKDHGHATECCTVGGTHEFGADRLVTSTSSSKELHKGSRLKAALQAAMLKRPEIHKKKYLHDQSATSDTVLKCKVSSQDQVEVSAYNTLKKSISVEETNVKHERQNSTFETSKCLSVNDLNHIKTDLCSQLKNSDSISPSEKPAVRDLPNHVLAISSVTSEMSAVPEYKYIWQGVFEVSRSGKSPNLYTGIQAHLSSCASPKVLDVVNKILPEISLHEVSRLSTWPSHFRQCGAKEDNIALYFFAKDIESYERHYKSLLDHMIRHDLALKGFIDGVELLIFASNQLPENSQRWNMLFFLWGIFKGRRVNHSDSVKNIVLPSLNVAVPIEKDFPTAVMTLSDTRCSPVRINEESIACGKDCSELPATSIDQGHIMLSKDFDIKDTIVDQTHLGSQVNFDRQDSRINNTKSSSRISTNVIQPCREMNTIDSSLKEKGSLSEHGLHRESKSPEEAGTIVRAMIVETKPDYGISVKQENSLSSRIPFLDNQEILTANSTLKDKISERTNNDENQRRPKRKEREDDLNINVEATFQGDLALEAVNCQLPNDIKVAHIDHSNTVMEAPAASCQEMPRTKMNRKLEDTDSSSKLQSGFSGVYGCHNFVARDSLTGSSTSLVNDFGSSSSVEDKGCKESCDEKIIHEDLGTMEKTFFPIDRHNTTDSRLVLNSMSMKGSHECREQFEVGIPSLELALGGEIKQSKNGTLPFLAGQADKKNNQEKTPDCLEAEQEDDDSLAASLSLSLSFPSSNKETTIPASKDEHHMNSSLLLFGRFTDK* 1390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g1301 1389 MobiDBLite consensus disorder prediction 563 606 - -
Tpr4g1301 1389 PANTHER ZINC FINGER PROTEIN, PUTATIVE-RELATED 1141 1366 - -
Tpr4g1301 1389 PANTHER ZINC FINGER PROTEIN, PUTATIVE-RELATED 3 1140 - -
Tpr4g1301 1389 MobiDBLite consensus disorder prediction 1117 1137 - -
Tpr4g1301 1389 SUPERFAMILY FYVE/PHD zinc finger 269 332 IPR011011 -
Tpr4g1301 1389 MobiDBLite consensus disorder prediction 219 243 - -
Tpr4g1301 1389 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 216 341 IPR013083 -
Tpr4g1301 1389 MobiDBLite consensus disorder prediction 1112 1137 - -
Tpr4g1301 1389 MobiDBLite consensus disorder prediction 1050 1070 - -
Tpr4g1301 1389 MobiDBLite consensus disorder prediction 221 243 - -
Tpr4g1301 1389 MobiDBLite consensus disorder prediction 1050 1068 - -
Tpr4g1301 1389 MobiDBLite consensus disorder prediction 563 585 - -
Tpr4g1301 1389 MobiDBLite consensus disorder prediction 1321 1344 - -
Tpr4g1301 1389 PANTHER - 3 1140 - -
Tpr4g1301 1389 PANTHER - 1141 1366 - -
Tpr4g1301 1389 SMART PHD_3 281 328 IPR001965 -
Tpr4g1301 1389 MobiDBLite consensus disorder prediction 587 601 - -
Tpr4g1301 1389 MobiDBLite consensus disorder prediction 373 395 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g1301 Tpr-Chr4 12572471 12581372 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g1301 - - mtr:MTR_0001s0570 2067.74