Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g1298 ATGGTAGCGGACAAAAACCTCTCCGTTACCATCAACGGGGGTGAATCCAAACAATCCACCACCACCACCGCCGCTATAATATTCACCTACGGAACATTAAAGAGAAACTTCTCCAATCACCCCCTTCTCCAAGACCTAATCAAAACAAACGACGCATCATTCATCGGAACATACCGCACCGTTCAAAATTACCCTCTCGTATGTGGTCCATACCGTGTCCCATTCCTTCTCAACATTCCAGGGTCGGGTCAACCCGTTTACGGAGAACTCTACTCCGTTTCATCATTCGGACTTTCTCGAATGGATGAACTTGAAGGAACCGCGAAAAATCACTACGAAAGGCTTCCTATTAAGGTCGTTCGTGCCGAGGAAGACGAAGACGGGAGAGAAACGGAAGAAGTAACGGTAACGGCTGCTGAAGCGTATTTTGCGCATGGTAATTATGCGATGGAGATGTGGAAAAAGAATGGAAAACGTGGGTTGAAGTGTTATACAGAGAAAGAAACTATTGGGTATGTTAAACGTAAAGATAGGCCTCAACATTTGACTTTTCTTGATCAAATTCAATTGTTTCTTTCTGATTGA 585 0.4427 MVADKNLSVTINGGESKQSTTTTAAIIFTYGTLKRNFSNHPLLQDLIKTNDASFIGTYRTVQNYPLVCGPYRVPFLLNIPGSGQPVYGELYSVSSFGLSRMDELEGTAKNHYERLPIKVVRAEEDEDGRETEEVTVTAAEAYFAHGNYAMEMWKKNGKRGLKCYTEKETIGYVKRKDRPQHLTFLDQIQLFLSD* 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g1298 194 CDD GGCT_like 30 144 IPR013024 -
Tpr4g1298 194 PANTHER TROPONIN C-AKIN-1 PROTEIN 18 193 IPR039126 GO:0061929
Tpr4g1298 194 Pfam Gamma-glutamyl cyclotransferase, AIG2-like 27 146 IPR009288 -
Tpr4g1298 194 Gene3D - 13 178 - -
Tpr4g1298 194 SUPERFAMILY Gamma-glutamyl cyclotransferase-like 25 147 IPR036568 -
Tpr4g1298 194 PANTHER BNACNNG06060D PROTEIN 18 193 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g1298 Tpr-Chr4 12544355 12545217 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g1298 K19761 - gmx:100802936 269.24