Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g1294 ATGGCAACAACAAGGTCACTGGTGGGACCTACACCATTTCTTCATCCATCATACAACAAAATCAATAATGCTTCACTAATCAAACCCCTCCTCCACTTGTCATCATCATCATCAATGTCCGCCTCCGACCACCACCAACAACCTCATCCATCCTTCGAAATCCTCGGAGGCGGACTTCACCGTTTCTTCCCATCTCTAACTCATCTCACTCGTCCCTACAATCCTTTCCCCTTCATCACTTGGAATCGCCACGTTGAAACCATATTTGCCTCGTTTTTTAGATCGACTCCTCATGTTACCCTCCGCCGCCAGTGTCTCAGAACTAAAGATGGAGGATCTGTCGCTCTCGACTGGGTTTCTGGTGACGATCGTCGCTTGCTGCCTCATGCTCCACTCCTCATTTTGCTGCCGGGCTTAACCGGAGGCAGTGGGGATTCTTATGTTAGACATATGTTAGTTAGAGCTCGAAGTAAAGGGTGGCGTGTTGTTGTGTTCAATAGTCGTGGCTGTGGAGATAGCCCTGTGACTACTCCTCAGTTCTATTCAGCATCATTTTTAGGAGATATGCATGAGGTTGTTTCACATGTCTCTGATAGATACCCCAATGCTAATTTATATGGCGTTGGTTGGTCACTCGGAGCAAATATTCTTGTTCGTTACTTGGGTCAGGAATCCCACAATTGTCCTCTTTCGGGTGCTGTATCTTTGTGCAATCCATTCAATTTGGTCGTGTCAGATGAGGACTTCCGAAAGGGCTTTAACAAAATTTATGACAAGGCTCTTTCTAGTGCTCTCTGCAAGATTTTCAACAAACATGCATTACTCTTTGAAGATATTGGTGGTGAGTATAACATTCCAATGGTCGCCAATGCCAAGTCTGTTAGGGAATTTGATGATGGACTGACCCGTGTTTCTTTTGGATTCAAGTCTGTGGATGACTACTACTTTAATTCAAGCAGTTCAGATTCCATTAAACACGTTCAAACACCTTTGCTCTGCATCCAGGCAGAGAATGATCCAATTGCTCCTTCTAGGGGAATTCCTCGTGAAGATATCAAGGAAAATCCAAACTGCTTGTTAGTAGTGACATCTAAAGGTGGTCACCTGGGGTGGGTTGCCGGTGACGAAGCTCCACTTGGAGCCCCTTGGACTGATCCTTTGGTGATTGATTTCCTTCAATATCTGGAGACAGAAGCAGCCAAAGCCCCGCAAACTTGTAGCAATTCTGGAGATAATAAAGAGACTTTGCAAAGTGTAGTGTGA 1263 0.4521 MATTRSLVGPTPFLHPSYNKINNASLIKPLLHLSSSSSMSASDHHQQPHPSFEILGGGLHRFFPSLTHLTRPYNPFPFITWNRHVETIFASFFRSTPHVTLRRQCLRTKDGGSVALDWVSGDDRRLLPHAPLLILLPGLTGGSGDSYVRHMLVRARSKGWRVVVFNSRGCGDSPVTTPQFYSASFLGDMHEVVSHVSDRYPNANLYGVGWSLGANILVRYLGQESHNCPLSGAVSLCNPFNLVVSDEDFRKGFNKIYDKALSSALCKIFNKHALLFEDIGGEYNIPMVANAKSVREFDDGLTRVSFGFKSVDDYYFNSSSSDSIKHVQTPLLCIQAENDPIAPSRGIPREDIKENPNCLLVVTSKGGHLGWVAGDEAPLGAPWTDPLVIDFLQYLETEAAKAPQTCSNSGDNKETLQSVV* 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g1294 420 Pfam alpha/beta hydrolase fold 131 369 IPR000073 -
Tpr4g1294 420 PIRSF Ab_hydro_YheT 25 419 IPR012020 -
Tpr4g1294 420 PANTHER ALPHA/BETA HYDROLASE FOLD PROTEIN-RELATED 18 407 - -
Tpr4g1294 420 PANTHER ABHYDROLASE DOMAIN-CONTAINING PROTEIN 18 407 - -
Tpr4g1294 420 Gene3D alpha/beta hydrolase 95 393 IPR029058 -
Tpr4g1294 420 ProSitePatterns Uncharacterized protein family UPF0017 signature. 298 339 IPR000952 -
Tpr4g1294 420 SUPERFAMILY alpha/beta-Hydrolases 99 378 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g1294 Tpr-Chr4 12515471 12519521 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g1294 78 396 Miscellaneous Gene Families AT2G03140 31.402 1.85e-41 155
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g1294 - - mtr:MTR_0004s0330 706.827