Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g1290 ATGGGTTCAGCAGCAGAAGTGTTGGCTGAGAGGAGTAGCAATAAACTCCTTGGAATAAGATTCCTTCAGTATTTAAAAGGAAGTCCTGTTTCCTACAAAACCCACCAAGCAATTGTTCTGATTGTAACTTTTTTAGCTTATGCTAGTTATCATGCTACTAGAAAAACCACAAGTATTGTAAAGAGTGTCCTTGATCCACAGTCGTCGTCAAAAAACAATTTAGGCTTCAATTTCTTTCCTTTGAGAAGGTTAGAAGTAACAAATCATACTCAGTCAAGGCTTTCTTGGAGCCTTGGTGATGGTTGGGCTCCGTTTAATGGATCGGACGGGACGTCCCTTCTTGGTGAATTGGATGTTGCTTTTCTTGCAGTTTATGCTTTTGGGATGTATTTTTCAGGACATTTTGGTGATAGGTGTAATTTAAGGATTTTTTTAACTATTGGGATGATAGGAACTGGTGTTTTCACTTCGCTCTTTGGATTAGGGTTTTGGGGAAACATTCACAATTTCTATTACTATTTAGTTGTTCAAATGATAGCTGGATTGTTTCAATCCACTGGATGGCCGTCGGTAGTTGCGGTTTTAGGTAACTGGTTTGGAAAGCGAAAGAGAGGGCTTATAATGGGAATTTGGAATGCTCATACTTCTGTTGGGAACATTGCTGGTTCTTTGATTGCATCTGCTATGTTGGGATATGGATGGGGATGGTCTTTTGTTGTGCCGGGGTTAATTATGTCTTTCCTCGGTTTGGTGGTTTTCTTAATTTTGCCTGTTTCTCCTGAATCTTCTGGAGTTGAGGAAGATGATGATAGTTGTCCCAAGAAAAGTGGAGATGATGTCACTGAATCTCTGTTAAGGCAAGAGACTCCTGCTGAAGAGAAAGAGAAAGCAGTCGGGTTCATCGAAGCCTGGAAAATTCCAGGGGTTGCTCCTTTTGCTTTTTGTTTGTTCTTTGCCAAATTGGTTGCATACACGTTTCTCTATTGGTTACCATTCTATGTTAGCCATACAGCTATTGATGGAAAATATCTATCTAGTGAGACATCAGGATCACTATCCACTTTATTTGATGTTGGAGGAGTGCTCGGAGGAATTCTAGCCGGACACATTTCTGACCGCTTAAATGCTAGAGCCATAACAGCAGCAAGTTTCATGTACTGTGCAATCCCTGCTCTCTTCTTCTATCGAAGTTATGGGCACATTTCGTTGCTTGTAAATGGATCGTTGATGTTTGTCACTGGTATGTTTGTAAACGGGCCATATGCTCTTATAACAACTGCAGTTTCGGCTGACCTGGGAACACACAAGTCATTGAAAGGAAATTCACGGGCTCTAGCAACGGTCACGGCTATTATTGATGGAACAGGTTCAATAGGGGCTGCAATTGGACCTTTATTAACAGGGTACATCTCTGCAAAGAGCTGGAGTGCAGTTTTCACAATGTTGATGGGTTCAGCTTTAATTGCAGGGCTGTTTCTCACCAAGCTTGTAGTGTCAGAGGTGGCCACGAAGATTGAAGAGTCAAGGTCTAATAGAGCGCCCGAATTTTCACTCGATGTATAA 1563 0.4152 MGSAAEVLAERSSNKLLGIRFLQYLKGSPVSYKTHQAIVLIVTFLAYASYHATRKTTSIVKSVLDPQSSSKNNLGFNFFPLRRLEVTNHTQSRLSWSLGDGWAPFNGSDGTSLLGELDVAFLAVYAFGMYFSGHFGDRCNLRIFLTIGMIGTGVFTSLFGLGFWGNIHNFYYYLVVQMIAGLFQSTGWPSVVAVLGNWFGKRKRGLIMGIWNAHTSVGNIAGSLIASAMLGYGWGWSFVVPGLIMSFLGLVVFLILPVSPESSGVEEDDDSCPKKSGDDVTESLLRQETPAEEKEKAVGFIEAWKIPGVAPFAFCLFFAKLVAYTFLYWLPFYVSHTAIDGKYLSSETSGSLSTLFDVGGVLGGILAGHISDRLNARAITAASFMYCAIPALFFYRSYGHISLLVNGSLMFVTGMFVNGPYALITTAVSADLGTHKSLKGNSRALATVTAIIDGTGSIGAAIGPLLTGYISAKSWSAVFTMLMGSALIAGLFLTKLVVSEVATKIEESRSNRAPEFSLDV* 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g1290 520 MobiDBLite consensus disorder prediction 267 283 - -
Tpr4g1290 520 PANTHER GLYCEROL-3-PHOSPHATE TRANSPORTER 1-RELATED 1 512 - -
Tpr4g1290 520 ProSiteProfiles Major facilitator superfamily (MFS) profile. 41 502 IPR020846 GO:0022857
Tpr4g1290 520 PANTHER MAJOR FACILITATOR SUPERFAMILY TRANSPORTER 16, ISOFORM B 1 512 - -
Tpr4g1290 520 Gene3D MFS general substrate transporter like domains 30 270 IPR036259 -
Tpr4g1290 520 SUPERFAMILY MFS general substrate transporter 111 497 IPR036259 -
Tpr4g1290 520 CDD MFS_SLC37A1_2 36 500 IPR044740 GO:0061513
Tpr4g1290 520 Pfam Major Facilitator Superfamily 114 432 IPR011701 GO:0022857|GO:0055085
Tpr4g1290 520 MobiDBLite consensus disorder prediction 262 283 - -
Tpr4g1290 520 PIRSF Hexose_phosphate_transp 22 514 IPR000849 GO:0016021|GO:0022857|GO:0055085
Tpr4g1290 520 Gene3D MFS general substrate transporter like domains 303 511 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g1290 Tpr-Chr4 12470714 12473829 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g1290 1 519 Organic Solute Cotransporters AT3G47420 71.183 0.0 728
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g1290 K13783 - gmx:100795072 873.618