LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Tpr4g1289	ATGATGGTGGATTTGGGTCCATTCTCTAACGAGAATTTCGACCCGAAGAAATGGATCAACTCGGCATGTCAGAGTCGTCACCCTCAGGAGACTTTGGATAAGCATCTCGTCGATTTGGAAATGAAACTCCAGATGGTTTCAGAGGAAATCGCCGCTTCTCTTGAGGAACAAAGCGCCGCCGCTCTCCTCCGTGTTCCTCGCGCCACTCGTGACGTCATCCGCCTCCGTGATGACGCTGTTTCTCTCCGTTCTGCTGTCTCCGCCATCCTCCAAAAGCTCAAGAAGGCAGAGGGATCGTCGGCTGAATCTATAGCGGCACTTGCTAAGGTTGATGTAGTCAAGCAGAGGATGGAAGCTGCTTATGAAACGTTGCAGGATGCTGCTGGATTAACTCAATTAAGTTCGACAGTTGAGGATGTATTTGCCAGTGGTGATCTCCCTCGCGCTGCTGAAACTCTTGCTAATATGAGGCATTGCTTGTCTGCTGTTGGGGAGGTTGCTGAATTTGCCAACATAAGAAAGCAACTTGAAGTCTTGGAGGATAGGCTAGACACAATGGTGCAGCCTCGTCTTACCGATGCATTATCTAATCGCAAGGTTGATGCTGCTCAAGATTTGCGTGGAATTCTCATTAGAATTGGAAGGTTTAAGTCTCTGGAGTCACAATATTCAGAGGTACATCTGAAACCAATAAAGCAGCTTTGGGAAGACTTTGAATCAAGAGAACGGGCTAATAAGAATGAAATGGAGAGGAGGTCAAGTGTTGGTGATTTTCAGTCAGTTTCACTTACAGTGTCATTCTCCAATTGGTTACCGAGCTTTTATGATGAGCTACTACTTTATCTTGAACAAGAATGGAAATGGTGTATGATTGCTTTCCCTGAAGACTATAAAATTCTTGTCCCAAGATTGCTAAGTGAGACTATGATGGCTATAGGTGCCAGTTTCATATCTCATATCAACCTTGCCATTGGGGATGCTGTTCCAGAAACAAAAGCACTGGCTAAAGGTTTGTCTGATATTTTATCTGGAGATATGCAAAAGGGTATAAAGCTTCAGACTAAGCACCTCGAGTCCTTGATTGAATTACACAACATCACGGGGACCTTTGCAAGGAATATTCATCACTTATTTTCTGGTTCTGATGTACGAGTTTTAATGGATGTGCTGAAAGCTGTGTACTTTCCATATGAATCGTTTAAACAGAGGTATGGACAAATGGAGCGGGCCATCCTTTCCTCTGAGATTGCAGGAATAGATTTAAGAGGAGCTGTAATTCGAGGGGTGGGAGCCCAAGGAGTTGAACTCAGTGAAACTGTTCGTAGGATGGAGGAGTCTATTCCTCAAGTTATTATACTCCTTGAAGCAGCTGCCGAGAGATGCATCAGCTTCACTGGAGGTTCTGAGGCAGATGAGCTGATTCTTGCCCTTGATGACATAATGTTAAAATACATTTCCACTCTGCAAGAAACTCTCAAGTCACTAAGAACTGTCTGTGGTGTGGATTATGGCGGGGATGGTTCTGGAAGGAAAGAGATGGAGAAGAAAGATGGAAACCAAAATGCTCGGAGAGTTGATTCGATCTCAAATGAAGAGGAATGGTCCATGGTCCAAGGGGCACTGCAGATCCTTACAGTTGCAGATAGTTTGACAAGCAGATCTTCTGTCTTTGAAGCATCTTTAAGAGCTACTCTTGCTAGATTAAGCACAACTTTATCTTTTTCAGCATTTGGTTCAAGTCTAGATCAAAACCAGACTATAAATAACAATGAAGACAGGGAGCCATCTTTTGGTGGAAGGGCTGCCTTGGACATGGCAACACTGCGGCTGGTTGATGTGCCCGAGAAAGCCAGGAAACTCATCAGCCTTTTGAATCAGTCTAAAGATCCCCGTTTCCATGCTCTTCCCCTTGCATCTCAAAGAGTTGCAACATTTGAAGACACAGTTAATGAACTTGTATATGATGTCCTCATATCTAAAGTACGGCAACGCCTCAGTGATGTGTCCCGCTTGCCAATATGGTCAGCAGTTGAGGAACAAAGTGCTTTTCATCTCCCTACCTTCAGTGCATATCCACAGTCCTATGTGACCAGTGTTGGTGAGTATCTTCTTACTTTACCCCAACAATTGGAGCCCCTTGCTGAGGGAATATCTAGCAGTGAAGCCAATGATGAAGCACAGTTCTTTGCAACTGAATGGATGTTCAAGGTTGCAGAGGGTGCAACAGCACTTTACATAGAGCAATTGCGTGGGATTCAGTACATTACAGATCGCGGTGCGCAGCAGCTATCAGTTGATATTGATTATCTTAGTAATGTGCTTTCCGCTTTGTCAATGCCCATCCCTGCAGTTCTGGCTACATTTCACAGTTGTTTATCTACCCCAAGAGACCAGCTAAAAGATTTTCTGAAGACAGATTCAGCAAACCAACTTGATCTTCCAACAGCAAACCTCGTGTGTAAGATGCGGCGTGTGAATTTAGATTCATGA	2490	0.4434	MMVDLGPFSNENFDPKKWINSACQSRHPQETLDKHLVDLEMKLQMVSEEIAASLEEQSAAALLRVPRATRDVIRLRDDAVSLRSAVSAILQKLKKAEGSSAESIAALAKVDVVKQRMEAAYETLQDAAGLTQLSSTVEDVFASGDLPRAAETLANMRHCLSAVGEVAEFANIRKQLEVLEDRLDTMVQPRLTDALSNRKVDAAQDLRGILIRIGRFKSLESQYSEVHLKPIKQLWEDFESRERANKNEMERRSSVGDFQSVSLTVSFSNWLPSFYDELLLYLEQEWKWCMIAFPEDYKILVPRLLSETMMAIGASFISHINLAIGDAVPETKALAKGLSDILSGDMQKGIKLQTKHLESLIELHNITGTFARNIHHLFSGSDVRVLMDVLKAVYFPYESFKQRYGQMERAILSSEIAGIDLRGAVIRGVGAQGVELSETVRRMEESIPQVIILLEAAAERCISFTGGSEADELILALDDIMLKYISTLQETLKSLRTVCGVDYGGDGSGRKEMEKKDGNQNARRVDSISNEEEWSMVQGALQILTVADSLTSRSSVFEASLRATLARLSTTLSFSAFGSSLDQNQTINNNEDREPSFGGRAALDMATLRLVDVPEKARKLISLLNQSKDPRFHALPLASQRVATFEDTVNELVYDVLISKVRQRLSDVSRLPIWSAVEEQSAFHLPTFSAYPQSYVTSVGEYLLTLPQQLEPLAEGISSSEANDEAQFFATEWMFKVAEGATALYIEQLRGIQYITDRGAQQLSVDIDYLSNVLSALSMPIPAVLATFHSCLSTPRDQLKDFLKTDSANQLDLPTANLVCKMRRVNLDS*	830

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Tpr4g1289	829	Pfam	Golgi complex component 7 (COG7)	4	824	IPR019335	GO:0006886\|GO:0017119
	Tpr4g1289	829	PANTHER	CONSERVED OLIGOMERIC GOLGI COMPLEX COMPONENT 7	1	823	IPR019335	GO:0006886\|GO:0017119
	Tpr4g1289	829	Coils	Coil	36	56	-	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Tpr4g1289	K20294		-	gmx:100794449	1436.4

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Tpr4g1289	4	12455030	12461242	Tpr4g1289	4	12455030	12461242	ECH