Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g1288 ATGGCCTCCTCACTCGCAGTCAAACGCCTTCTCTCTTCCTCCAACCTTCTCTCAAAGTCTCTCCGTCCCGCCGCCGCCTCCACCGCTTCCCGCTCTTTCAACACCAACGCCATGCGCCAGTACGACGAACACTCCGATGATCGCAATGTTGATGTCGATCGTCGCTCTGATCGCTCTTTCGCTCGCAATAACCTCTTCTCAGATGTGTTCGATCCGTTTTCTCCAACTCGGAGCTTAAGCCAAGTCCTAAACATGGTGGATCAGCTAATGGACACTCCATTCGTCTCTGCTACCCGTGGAATCGGAGCTGCCGGTGGAGTTCGACGTGGTTGGAATGCGAAAGAAACAGAGGATTCTCTGCATCTACGTGTTGATATGCCTGGACTTGGTAAGGAAGATGTGAAGATCTCTGTTGAACAGAACATACTTACAATCAAAGGTGAAGGTGCTAAAGAAAGTGAGGAAGAAGAGGAAGGTGTTCGTCGATTCACTAGCAGAATTGATTTACCTGAGAAGCTTTACAAGATTGATCAGATTAAAGCTGAGATGAAAAATGGTGTGCTTAAGGTTATTGTGCCTAAGATGAAGGAAGAGGAAAGAAACGATGTGATTAATGTTAACGTTGAGTAG 630 0.473 MASSLAVKRLLSSSNLLSKSLRPAAASTASRSFNTNAMRQYDEHSDDRNVDVDRRSDRSFARNNLFSDVFDPFSPTRSLSQVLNMVDQLMDTPFVSATRGIGAAGGVRRGWNAKETEDSLHLRVDMPGLGKEDVKISVEQNILTIKGEGAKESEEEEEGVRRFTSRIDLPEKLYKIDQIKAEMKNGVLKVIVPKMKEEERNDVINVNVE* 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g1288 209 Gene3D - 63 208 IPR008978 -
Tpr4g1288 209 CDD ACD_sHsps-like 114 194 - -
Tpr4g1288 209 PANTHER 23.6 KDA HEAT SHOCK PROTEIN, MITOCHONDRIAL 1 208 - -
Tpr4g1288 209 SUPERFAMILY HSP20-like chaperones 82 200 IPR008978 -
Tpr4g1288 209 Pfam Hsp20/alpha crystallin family 113 208 IPR002068 -
Tpr4g1288 209 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 102 209 IPR002068 -
Tpr4g1288 209 PANTHER 23.5 KDA HEAT SHOCK PROTEIN, MITOCHONDRIAL 1 208 IPR044656 -
Tpr4g1288 209 MobiDBLite consensus disorder prediction 28 53 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g1288 Tpr-Chr4 12449429 12450496 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g1288 K13993 - gmx:547852 270.396
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g1288 4 12449429 12450496 Tpr4g1288 4 12449429 12450496 ECH