Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g1243 ATGTCCATCTTCCATCACCACACTCTGTTTCCAAACACAACAATGGCTTCATGTACCGCTTCACCTTCATCATCACTCATGTTAACTCACCCTACTTCTTCCATCATCATCAATTCACAAGACCATTCTTCTTCTTCTTCTTCTTCTCTTCGAATTTCTAGAACCTTCTTTTTATCTCCTCTTGTTTTCAAATCTTCTAAGTCGGTTAATCTAAGTTACCAATCTAAGTCTTGTTTTTCCATTGCTGCTGCTGCTGTTGCTACTGATGTAGCGGAAACTGTTGATGAAGATGAGGAGGATGGTGTTGAGGAAGAGGATGGTGGTGCTACTAACACTGTTGTTGTTACTACTAAGCCTAAGAAAGGAAAAGCTGCATTGCTTCTTAAGAGTGATAGGACAAGATCTAAGAGATTCTTGGAAATTCAAAAATTGAGGGAGATTAAGAAAGAGTACGACTTGAAGACAGCAGTTTCTTTGGTAAAAGAAACAGCTAAAACAAAGTTTGTTGAAACAGTAGAAGCCCATTTCCGCCTTAACATTGACCCTAAATATAATGATCAACAATTAAGAGCTACGGTAAATCTGCCAAAGGGAACCGGAAATCCTATTAAAGTGGCTGTTCTTACTCAAGGTGAAAGATTCGACGAAGCAAAAAATGCAGGAGCAGATATAGTGGGTGGAGAGGATCTGATAGAACAGATAAAAGGAGGATTTATGGAATTTGATAAATTAATTGCTTCTCCAGATATGATGCCTAAGGTTGCTATCCTGGGTAAGATTCTAGGGCCAAGAGGACTCATGCCAAATCCAAAAGCTGGCACTGTAACAGCTAACATTCCTCAGGCTATAGCAGAATTCAAGCAAGGAAAAGTTGAATACAGGGCAGATAAAACAGGAATCGTGCATTTACCTTTTGGAAAAGCCGATTTTCCAGAAGAGGATCTTGTTACAAACTTGCTCTATGCAATAAGATCAGTAGAAGCAAACAAACCAAAGGGTGCAAAGGGTGTATACTGGAAAAGTGCACACATATGCTCAGCAATGGGACCTTCGATTAGGTTAAATATCAAGGAAATGCTTGATTACAGGCTCCAATCAGAATAG 1104 0.394 MSIFHHHTLFPNTTMASCTASPSSSLMLTHPTSSIIINSQDHSSSSSSSLRISRTFFLSPLVFKSSKSVNLSYQSKSCFSIAAAAVATDVAETVDEDEEDGVEEEDGGATNTVVVTTKPKKGKAALLLKSDRTRSKRFLEIQKLREIKKEYDLKTAVSLVKETAKTKFVETVEAHFRLNIDPKYNDQQLRATVNLPKGTGNPIKVAVLTQGERFDEAKNAGADIVGGEDLIEQIKGGFMEFDKLIASPDMMPKVAILGKILGPRGLMPNPKAGTVTANIPQAIAEFKQGKVEYRADKTGIVHLPFGKADFPEEDLVTNLLYAIRSVEANKPKGAKGVYWKSAHICSAMGPSIRLNIKEMLDYRLQSE* 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g1243 367 TIGRFAM rplA_bact: ribosomal protein uL1 134 358 IPR005878 GO:0003723|GO:0003735|GO:0006412|GO:0015934
Tpr4g1243 367 PANTHER MITOCHONDRIAL RIBOSOMAL PROTEIN, LARGE 140 359 - -
Tpr4g1243 367 ProSitePatterns Ribosomal protein L1 signature. 251 269 IPR023673 -
Tpr4g1243 367 Pfam Ribosomal protein L1p/L10e family 161 350 IPR028364 -
Tpr4g1243 367 PANTHER RIBOSOMAL PROTEIN L7AE FAMILY MEMBER 140 359 - -
Tpr4g1243 367 CDD Ribosomal_L1 153 354 IPR028364 -
Tpr4g1243 367 Hamap 50S ribosomal protein L1 [rplA]. 131 359 IPR005878 GO:0003723|GO:0003735|GO:0006412|GO:0015934
Tpr4g1243 367 Gene3D - 198 289 IPR016095 -
Tpr4g1243 367 Gene3D - 151 354 - -
Tpr4g1243 367 SUPERFAMILY Ribosomal protein L1 137 356 IPR023674 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g1243 K02863 - gmx:100819124 475.322