Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g1216 ATGGGTTTTGATAATGAGTGCATAATTAATATTCAATCTCTTGCTGGAGAGTATTTTTGTCCTGTTTGTCGTCTTCTTGTGTTTCCGAATGAAGCTTTACAGTCGCAATGTACTCATTTGTATTGTAAGCCGTGTTTGACGTATGTCGTGAGTACTACCAGAGCTTGTCCTTATGATGGTTATTTGGTCACCGAGGCCGATTCCAAGCCTTTGAAAGAGTCGAATAAGCCATTGGCTGAAACTATTGGAAAAATAGCAGTTCATTGCCTGTACCATAGGAGTGGATGCTCATGGCAAGGAACTTTGTCTGATTGTACAACTCATTGTTCTGGATGTACTTTTGGAAATTCTCCGGTGGTTTGCAATAGGTGTGGGATTCAAATAGTGCATCGTCAAGTAGAAGAACATGCACAAACTTGTTCTGGTCAGATGCAGCAGGGGGCCGTTACCCAGGATCCTTCAGCTACCGGTGCTACTGCTGTTGCATCTACTGATCAGAGCCAGACTGCTGCTCCAGCTGCAGACACAGCTTCACAACCGGTGACTTCTCAAACAGTTGTTGCAACTACTGCAGCTGGGCATGTTCCGAATCAGCTACCCAACCCGGCATCTCAAACCCAAGCTTTAGGTCAAGCTGTTGTGCAGCCAACGGCAGAGCAATGGTATCAGCAGCAACAATATCAACAATACTACCAGCAATACCCCGGACAAGATCCATACCAACAGCAGTATCAACAGTATTACGCCTATCAACAGGCTGCAGTTCCACAATACCAGCAGGCCTATGTCCAGCCTCAGCCACAAGCACAACCCCTGTCACAGCCTCAACCTCAAGCACAACCGGTTTCACATGTGCAGACTCCTGCGGTCCCACAATCTCAGAATCAGATGCAAGTTCACCAACAACCACAACAGCTTCAACCTGCTGTACAGCCACATGGTCAGATGAGTCACCCACCTGGCCATGGTCTCCCTCAGCCACAGTCTTATCCTTACCCCCAAGTTCAGCCTCATTCTGGGCAACCTCAACCCCATATGCAAATCACTCCTTATCAGCAACCTCATCCTCAAATGCAGCATTCACAGCCTCAAAATCAGCAACCTGTTCAGAAGTATCCTGTTCCTCAACCTCAAGTTCATTCACAAATGCAACCTAATGCTGCAGTTCAACATCCTTCTCAGCCTCAGATGCAATCCCACCAACCCATGACTCCTAATGTACAACCTCAAGTGCAAAATGCAATGCCACATGCAGTGACAGGTCATCAGTCTTATCCCCAACCTCTGCCTCATCAGAATATGCAAGTGGGAGCCCCTCAATCTAATATCCACTTGAATCCTCAAAGTGGGCCTCAACACCAGCAGGGCCAGCATGCTGTCCAGATGCAGAATCAGTTTCCTCAGCAAACTCCAATGATGCGCCCAAATCAGTCACATGCTATGTATCCTAACCAGCAAGGTCAAAACACCCTTCCTCTGCAGCAGCAGCAGCAGCCAGGATATAATCCTAATCAACAAACTGGACAAACCAATAATCAACGTCCTATTTCACAACCGGTTCAACAAATATTACCTCAACAACCATTTGCGCAACACCAGATCCCCATGCCATCTCATCTACGACCCCAAGGTCCAGTAAATTCATTTCCCAAGCAGGCTTATCCACAGCCCAAGGGTAATATTGCACCATCTCAAAATGCTGTTGGAAGGCCTTCAATTCCCAATCATGCAGGACATGTACAGCCATCTGCACAATCTGCCAATACAATTCCTGTTAATAATCAAGTGCAGTCAAGGGCACCAGAACCAATTGATAAACAAAATGTCACTGAGCAACAAACCGACTCTGCCTCTGGGAAACTTGGAAAAAATGAGTTGAAATCTGAAAAGGAAACAAATTTGAAATCAACTGAGGTTGGGAGTAAGCAAAATAGTGAAGATCCACACTCTGTGAAGACTTCAGGTCCAAATGCTAATGCATTAGAAAATGGTGATACATTGCATAAGAATGTTGGAAAGGGAGAGGCTTCTGGAAACACTGGGGTTCAACATAATAGTAATAATGAGCATGCTGTTGTTCAAGGCAATGAGATTCAAGATGGACCTCCGCTGAAGACAGACACTAAATTATCTGAATCAGAAACTGACAAACTGCATAGCGACGATAAATGTGCTCCAAGACCTTCTGGTGCTGACTCTCAGACCAATGGTGGTCATGGACCTGGGGGGTTAGCTCAGCCACATCCAACAGGTCCAAATCAGCATCTCTCTGCAACATACGCTTCAACTCTTCTCAGGAATCATGGAACCGCACCTGCTCATCATTCTGGACAGCACTTAAACTCAATGGATAATTTTCAGCCAACCATGTTCAAGCAACCACATGGTTCTGATGTCCAGTTTAATATTCCAGGGCGTAACTTTCAACCCCAGCCTCATGGACCCCCAGCAGGACCATATAACCATGTTCATGAACCACCTTTCCATAATGGAGCTTCCAATTTGTCTCGAGGGCCACCGTTCGGTGCACCCCCACATGGAGATATGCATGGTGGAATGGCATCCAACTTTCCACCACACACTCCTGAAGGTTTTGGTGTGCAAGATGAAAGGTTCAAATCTTTTCAGATTCCTAGTCAACAAAATATTGATCGGAGAGAGTTTGAAGAAGATCTCAAAAAATTCCCTAGGCATCCTTTGGATGCTGAGCCAGGTTCTAAATTTGGAAATCATTCATTTGGTCCACATGAAGCTGGAAAGAGGCCAGTTGGTTTTCATGATGAGGCCATCAAGAAAGCAGGTTCAAATCTTCATCCTGGTCATCTTGGACCAGGTCCTGGATATGGGGTACATCACATGGATGGTATGGCTCCAAGAAGTCCTGGTAGTGAATACATTGATATGCCTTCCAGGAGATTGGGGCCCCTCTCTGGTGGTCTTATTAGTAAGTCAGGTATTGATGATTTTGAAGGCAGAACTGCAAGTCGATTTGGTGATTCAGTTGGCATTGCATTCCGTGATGGTCGATTTCCTCATCCCCCTAGCCATTTGCCTAGAGATGAATTTGACGGTTTTGGTAATTTTCGAATGGGTGAACATCCAAGGAGGGGCAATTTCATTGGTCAAGACGAATTTACTGGCCATTTCCAAAGGGGTGAGCATTTGGGTGCACACGATTTTCCTAGACATTTGCAGCTTGGGGAGCGTATCGGTTTTGGGGATCATCCTGGTCATATGCGAGCCTTTGAACTTAGTGGTTCTCGGAGTTTTGAATCTTTTACCAAAGGCAATCGGCCAGGTCATCCACAGCTCGGTGAACCTGGGTTTAGGAGCAGCTTTTCCCATGCAGGATTTAATAATGATGCTGGATTTTTAACAGGAGATACCAGGTCCTTTGATAATTTGAGGAGAAGAAAGGCTGCCAGTATGGGATGGTGCCGGATATGCAAAGTCGACTGTGAAACTGTCGAAGGCTTGGAATTGCATTCTCAAACAAGGGAGCATCAGAAGATGGCCATGGATATAGTTAAAACAATCAAACAAAATGCAAAGAAACAGAAACTAATACCCAGTGAACAATCCTCAGTTGAAGATGGAAACAAGATGCGAGCTACTGGTTATGAGGGTCACGGAAATAAGCATTGA 3645 0.4551 MGFDNECIINIQSLAGEYFCPVCRLLVFPNEALQSQCTHLYCKPCLTYVVSTTRACPYDGYLVTEADSKPLKESNKPLAETIGKIAVHCLYHRSGCSWQGTLSDCTTHCSGCTFGNSPVVCNRCGIQIVHRQVEEHAQTCSGQMQQGAVTQDPSATGATAVASTDQSQTAAPAADTASQPVTSQTVVATTAAGHVPNQLPNPASQTQALGQAVVQPTAEQWYQQQQYQQYYQQYPGQDPYQQQYQQYYAYQQAAVPQYQQAYVQPQPQAQPLSQPQPQAQPVSHVQTPAVPQSQNQMQVHQQPQQLQPAVQPHGQMSHPPGHGLPQPQSYPYPQVQPHSGQPQPHMQITPYQQPHPQMQHSQPQNQQPVQKYPVPQPQVHSQMQPNAAVQHPSQPQMQSHQPMTPNVQPQVQNAMPHAVTGHQSYPQPLPHQNMQVGAPQSNIHLNPQSGPQHQQGQHAVQMQNQFPQQTPMMRPNQSHAMYPNQQGQNTLPLQQQQQPGYNPNQQTGQTNNQRPISQPVQQILPQQPFAQHQIPMPSHLRPQGPVNSFPKQAYPQPKGNIAPSQNAVGRPSIPNHAGHVQPSAQSANTIPVNNQVQSRAPEPIDKQNVTEQQTDSASGKLGKNELKSEKETNLKSTEVGSKQNSEDPHSVKTSGPNANALENGDTLHKNVGKGEASGNTGVQHNSNNEHAVVQGNEIQDGPPLKTDTKLSESETDKLHSDDKCAPRPSGADSQTNGGHGPGGLAQPHPTGPNQHLSATYASTLLRNHGTAPAHHSGQHLNSMDNFQPTMFKQPHGSDVQFNIPGRNFQPQPHGPPAGPYNHVHEPPFHNGASNLSRGPPFGAPPHGDMHGGMASNFPPHTPEGFGVQDERFKSFQIPSQQNIDRREFEEDLKKFPRHPLDAEPGSKFGNHSFGPHEAGKRPVGFHDEAIKKAGSNLHPGHLGPGPGYGVHHMDGMAPRSPGSEYIDMPSRRLGPLSGGLISKSGIDDFEGRTASRFGDSVGIAFRDGRFPHPPSHLPRDEFDGFGNFRMGEHPRRGNFIGQDEFTGHFQRGEHLGAHDFPRHLQLGERIGFGDHPGHMRAFELSGSRSFESFTKGNRPGHPQLGEPGFRSSFSHAGFNNDAGFLTGDTRSFDNLRRRKAASMGWCRICKVDCETVEGLELHSQTREHQKMAMDIVKTIKQNAKKQKLIPSEQSSVEDGNKMRATGYEGHGNKH* 1215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g1216 1214 MobiDBLite consensus disorder prediction 352 404 - -
Tpr4g1216 1214 MobiDBLite consensus disorder prediction 151 181 - -
Tpr4g1216 1214 MobiDBLite consensus disorder prediction 600 621 - -
Tpr4g1216 1214 ProSiteProfiles Zinc finger RING-type profile. 20 59 IPR001841 -
Tpr4g1216 1214 SUPERFAMILY TRAF domain-like 84 142 - -
Tpr4g1216 1214 MobiDBLite consensus disorder prediction 600 663 - -
Tpr4g1216 1214 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 8 123 IPR013083 -
Tpr4g1216 1214 ProSitePatterns Zinc finger RING-type signature. 37 46 IPR017907 -
Tpr4g1216 1214 MobiDBLite consensus disorder prediction 1184 1200 - -
Tpr4g1216 1214 MobiDBLite consensus disorder prediction 637 663 - -
Tpr4g1216 1214 MobiDBLite consensus disorder prediction 265 312 - -
Tpr4g1216 1214 MobiDBLite consensus disorder prediction 622 636 - -
Tpr4g1216 1214 MobiDBLite consensus disorder prediction 492 513 - -
Tpr4g1216 1214 MobiDBLite consensus disorder prediction 265 321 - -
Tpr4g1216 1214 PANTHER AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN 1A-LIKE 1 1213 - -
Tpr4g1216 1214 MobiDBLite consensus disorder prediction 707 726 - -
Tpr4g1216 1214 MobiDBLite consensus disorder prediction 1183 1214 - -
Tpr4g1216 1214 MobiDBLite consensus disorder prediction 693 738 - -
Tpr4g1216 1214 SUPERFAMILY RING/U-box 13 71 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g1216 - - cam:101490739 1363.21