Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g1211 ATGGGTTTTCTTTTAAGATTTTCATTTTCTAGTTTTTTATTAGTACTAGGTTTGGTTTTGAATTTGGTGTTTGTTTGTAATGGAGGTACATCTAGTACTTTTGTTAGGAAAGTTGAGAAAGCTACTGATATGCCACTTGATAGTGATGTTTTTCATGTTCCTTCTGGTTATAATGCTCCCCAACAGGTTCATATAACACAAGGTGATCTTGTGGGGAGAGCAGTAATCGTATCGTGGGTGACCGAGGATGAACCAGGGTCAAACGCAGTACGTTACTGGAGTGAAAACAGCAAACATAAGAAGCTAGCATCAGGGAAAGTTGTAACTTATAGATACTTCAATTACACATCTGGTTTTATTCATCACACTACTATTAGGAATTTGAAGTACGACACCAAATATTACTACGAGGTTGGGCTTGGAAATACAACAAGGCAGTTTTGGTTTACAACTCCTCCGGAAATTGGTCCTGATGTTCCATACACATTCGGTCTCATAGGGGATCTTGGTCAGAGCTTTGATTCAAACACGACACTTTCACACTATGAATTGAACCCAACAAAAGGGCAAACAGTGTTGTTTGTTGGAGATCTCTCGTATGCAGATAATTACCCGAACCATGACAATGTTAGATGGGATACTTGGGGAAGGTTTGCAGAGAGGAGCGTTGCTTATCAACCGTGGATATGGACTGTAGGAAACCATGAAATTGATTTTGCTCCTGAAATTGGCGAAACCAAACCATTCAAGCCTTATTCTCACCGATACCGTACTCCTTATAAAGCATCACAAAGTACTTCACCATTTTGGTATTCTATCAAGAGAGCTTCAGCACACATCATTGTCTTGGCCTCATATTCAGCATATGGAAAATATACACCACAATACAAATGGCTTGAACAAGAGCTACCAAAAGTTAACAGGACAGAAACTCCATGGTTGATTGTTCTAATGCATTCACCTTGGTATAACAGCTACAATTATCATTATATGGAAGGGGAAACAATGAGAGTAATGTATGAGCCATGGTTTGTTAAGTACAAGGTTGATGTTGTCTATGCTGGCCATGTGCATGCCTATGAACGTTCTGAACGTGTCTCGAATATTGCATATAATATTGTAAATGGTATTTGCGCTCCTATAAAAGATCAATCAGCTCCTGTATACATAACCATTGGAGATGGAGGGAACCTTGAAGGCTTAGCAACCAACATGACAGAACCACAGCCAAGTTACTCGGCATTCAGAGAAGCCAGCTTTGGACATGCCATTTTCGACATAAAGAACAGAACACATGCTTACTATAGTTGGCACAGAAATCAAGATGGTGACGCTGTTGAGGCTGATTCCCTTTGGTTTTTCAACAGATTCTGGAACCCAGTTGATGATTCCACTCGCCACGGTTCCCATTAA 1413 0.4006 MGFLLRFSFSSFLLVLGLVLNLVFVCNGGTSSTFVRKVEKATDMPLDSDVFHVPSGYNAPQQVHITQGDLVGRAVIVSWVTEDEPGSNAVRYWSENSKHKKLASGKVVTYRYFNYTSGFIHHTTIRNLKYDTKYYYEVGLGNTTRQFWFTTPPEIGPDVPYTFGLIGDLGQSFDSNTTLSHYELNPTKGQTVLFVGDLSYADNYPNHDNVRWDTWGRFAERSVAYQPWIWTVGNHEIDFAPEIGETKPFKPYSHRYRTPYKASQSTSPFWYSIKRASAHIIVLASYSAYGKYTPQYKWLEQELPKVNRTETPWLIVLMHSPWYNSYNYHYMEGETMRVMYEPWFVKYKVDVVYAGHVHAYERSERVSNIAYNIVNGICAPIKDQSAPVYITIGDGGNLEGLATNMTEPQPSYSAFREASFGHAIFDIKNRTHAYYSWHRNQDGDAVEADSLWFFNRFWNPVDDSTRHGSH* 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g1211 470 Gene3D - 156 465 IPR029052 -
Tpr4g1211 470 Pfam Iron/zinc purple acid phosphatase-like protein C 386 445 IPR025733 -
Tpr4g1211 470 Pfam Calcineurin-like phosphoesterase 162 360 IPR004843 GO:0016787
Tpr4g1211 470 SUPERFAMILY Metallo-dependent phosphatases 157 464 IPR029052 -
Tpr4g1211 470 Gene3D - 59 155 - -
Tpr4g1211 470 Pfam Purple acid Phosphatase, N-terminal domain 60 151 IPR015914 GO:0003993|GO:0046872
Tpr4g1211 470 PANTHER PURPLE ACID PHOSPHATASE 12 466 - -
Tpr4g1211 470 SUPERFAMILY Purple acid phosphatase, N-terminal domain 43 153 IPR008963 GO:0003993|GO:0046872
Tpr4g1211 470 PANTHER ACID PHOSPHATASE RELATED 12 466 IPR039331 GO:0003993
Tpr4g1211 470 CDD MPP_PAPs 157 455 IPR041792 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g1211 Tpr-Chr4 11715634 11719770 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g1211 47 445 Miscellaneous Gene Families AT1G13900 24.406 4.61e-23 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g1211 K22390 - gmx:100807555 880.167