Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g1210 ATGGGTCGTTTTCAAGGATTATTATTACTAGCTTTGGTTTTGAATTTGGTGTTTGTGTGTAATGGAGGTACAACTAGTATTTTTGTTAGGAAAGATGAGAAGAGTGTTGATATGCCACTTGATAGTGATGTTTTTCATGTTCCTTCTGGTTATAATGCTCCTCAACAGGTTCATATAACACAAGGTGATCTTGTGGGTAGAGCAGTAATCGTATCGTGGGTGACCGAGGATGAATCAGGGTCGAATGCAGTCCGTTACTGGAGTGAAAACAGCAAGCACAAGAAGTTAGCTAAAGGGAAAACTGTAACTTATAGATACTTCAATTACACATCTGGTTTTATTCATCACACTACTATTAAAAATTTGAAGTACAATACCAAATATTACTATGAGGTTGGACTTGAGCACACAACAAGACAGTTTTGGTTTACAACTCCTCCAGAAATTGGTCCTGATGTGCCCTACACATTTGGTGTCATGGGGGATCTTGGTCAGACCTTTGATTCAAACAGGACACTTTCTCACTATCATTTGAACTCAACACATGGACAAACAATGTTGTTTGTTGGAGATCTCTCTTATGCCGATGACTACCCGGATCATGACAATGTTAGATGGGATACTTGGGGAAGGTTTGCAGAGAGGAGCGCTGCTTATCAACCGTGGATATGGACCGTAGGAAACCATGAACTTGATTTTGCTCCAGAAATCGGTGAAAACAAACCATTCAAGCCTTTTTCGCACCGATACCGTACTCCTTATAAAGCATCACAAAGTACTTCACCATTTTGGTATTCTATCAAGAGAGCTTCAGCACACATCATTGTCTTGGCCTCATATTCAGCATATGGAAAATATACACCACAATACCAATGGCTTGAAGAAGAACTACCGAAAGTTAACAGGACAGAAACTCCATGGTTGATTGTTCTCATGCACTCACCTTGGTATAATAGCAACAGTTATCATTACATGGAAGGAGAAACAATGAGAGTAATGTTTGAGTCATGGTTTGTTAAGTACAAGGTTGATGTTGTGTTTGCTGGTCATGTGCATGCCTATGAAAGATCTGAACGTGTCTCGAATATTGCATATAATATCGTAAATGGTATTTGCGCTCCTGTAAAAGATCAATCAGCTCCTGTATACATAACCATTGGAGATGGAGGGAATATTGAAGGCTTAGCAACCAACTACACAGAACCACAGCCAAGTTACTCAGCATTTAGAGAAGCTAGCTTTGGACATGCCATTTTTGACATAAAGAACAGAACACATGCTTACTATAGCTGGCACAGAAATCAAGATGGTGATGCTGTTAAGAGTGATTCCCTTTGGTTTTTCAACAGAGTTTGGAAGCCAGTTGATGATTCCACATGA 1380 0.3964 MGRFQGLLLLALVLNLVFVCNGGTTSIFVRKDEKSVDMPLDSDVFHVPSGYNAPQQVHITQGDLVGRAVIVSWVTEDESGSNAVRYWSENSKHKKLAKGKTVTYRYFNYTSGFIHHTTIKNLKYNTKYYYEVGLEHTTRQFWFTTPPEIGPDVPYTFGVMGDLGQTFDSNRTLSHYHLNSTHGQTMLFVGDLSYADDYPDHDNVRWDTWGRFAERSAAYQPWIWTVGNHELDFAPEIGENKPFKPFSHRYRTPYKASQSTSPFWYSIKRASAHIIVLASYSAYGKYTPQYQWLEEELPKVNRTETPWLIVLMHSPWYNSNSYHYMEGETMRVMFESWFVKYKVDVVFAGHVHAYERSERVSNIAYNIVNGICAPVKDQSAPVYITIGDGGNIEGLATNYTEPQPSYSAFREASFGHAIFDIKNRTHAYYSWHRNQDGDAVKSDSLWFFNRVWKPVDDST* 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g1210 459 SUPERFAMILY Purple acid phosphatase, N-terminal domain 36 147 IPR008963 GO:0003993|GO:0046872
Tpr4g1210 459 PANTHER ACID PHOSPHATASE RELATED 7 459 IPR039331 GO:0003993
Tpr4g1210 459 Gene3D - 53 149 - -
Tpr4g1210 459 SUPERFAMILY Metallo-dependent phosphatases 151 458 IPR029052 -
Tpr4g1210 459 CDD MPP_PAPs 151 449 IPR041792 -
Tpr4g1210 459 Pfam Calcineurin-like phosphoesterase 156 354 IPR004843 GO:0016787
Tpr4g1210 459 Pfam Iron/zinc purple acid phosphatase-like protein C 380 439 IPR025733 -
Tpr4g1210 459 Gene3D - 150 459 IPR029052 -
Tpr4g1210 459 PANTHER PURPLE ACID PHOSPHATASE 7 459 - -
Tpr4g1210 459 Pfam Purple acid Phosphatase, N-terminal domain 54 145 IPR015914 GO:0003993|GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g1210 Tpr-Chr4 11705994 11710017 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g1210 41 439 Miscellaneous Gene Families AT1G13900 24.454 7.64e-23 99.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g1210 K22390 - gmx:100807555 829.706