Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g1204 ATGTCGTTTTCATCTGAGAAGAAGAATCATCATTCTCAGAACCCTAACCCTAATCCAACTTCACCATTGAAGAAAAGAGGAACAAGATGGTCAGATTTATGGCTGAAACACACCACAAAATCAAAGCCATTAAATCAAATGGTTGTTGCTGCTGCAATGCAACAACTTCAATCTCTTTCATCACCTCGAAAATCAAACAACAATAATGTCAACACATTAATCCCTAATTTCTCAATCATTGATCAAACCCTTTTGTTATCTGATGAACTTCTTCTAAAGATTCTCTCTAAGCTTCCTGATTCACAGAGAAATTCAAATTCATTAGTTTGTAAAAGATGGTTGAATCTTCAAGGTAGATTGGTTCGTTCGATTCGGATTCTTGATTGGAATTTTGTTTTATCTGGTAGGTTAATTCATAGATTCCCAAATCTTAATCATGTTGATTTGATTCCTGGGTGTTTGATTTTAACACAAAGTTCGAATATTTTTTTGAGTAGTAATGTTTTGAATATGCATATTGATTCTGGGTCTTCGCCGAATTGGTTTTTTTGTGAGGAGAATATGCTTCCTGTTGAGGTTATTGATAATGGATTAAGTGCTTTGGCTAATGCTTGTCCTAATTTGAGAAGGGTTCAAGTGATTGGTGCTAGTGAAATGGGTTTGCTTAGTGTGGCTGAAGAGTGTCCTACATTGCAGGAATTGGAATTACAAAAGTGTAGTGATAATGTGTTGCGCGGGATTGCGGCGTGTGGGAATTTGCAGATTTTGAAATTGGTTGGTAATGTTGATGGTTTTTATGGTTCGGTTGTTTCTGATATCGGTTTGACTATTTTAGCTCAAGGTTGTAAGAGGCTTGTGAAGCTTGAGCTTTGTGGTTGTGAAGGTAGTTTTGATGGGATTAAGGCTATTGGTAAGTGTTGTCAGATGTTGGAGGAGTTGACTTTGTCTGATCATAGGATGGATGATGGATGGTTGGCTGGAGTTTCGTATTGTGAGAATTTGAAGACATTGAGGTTAACGTCTTGTAAGAAGATTGATTTGAATCCGGGACTCGAAGAGTATTTGGGTTCTTGTCCTGCACTTGAAAGGTTGCATTTACAAAAGTGTCAGTTGCGGGATAAGAAGAGCGTTTCCGCTTTGTTTTCTGTTTGCAGGGCTGCTAGGGAGATTATTATTCAGGATTGCTGGGGATTGGATAATGGCCTGTTCGGCTTTGCAACTGTTTGCAGGCGCGTAAAATTGCTTTACGTAGAAGGATGCTCATTGCTAACAACAGAAGGTTTGGAATCTGTAATACATTCGTGGAAGGAGCTTCAAAGCCTTAGAGTAGTCTCATGTAAGCATATAAAGGATAGTGAAATCTCTCCTTCACTTGCAACCTTATTTACCACTCTCAAAGAATTGAAATGGAGGCCAGATACCAAATCACTTCTTCCATCAAGTCTTAGAGGAATAAGTATGGGAAAGAAAGGTGGTAAATTTTTTAAAAGGACATGA 1497 0.3808 MSFSSEKKNHHSQNPNPNPTSPLKKRGTRWSDLWLKHTTKSKPLNQMVVAAAMQQLQSLSSPRKSNNNNVNTLIPNFSIIDQTLLLSDELLLKILSKLPDSQRNSNSLVCKRWLNLQGRLVRSIRILDWNFVLSGRLIHRFPNLNHVDLIPGCLILTQSSNIFLSSNVLNMHIDSGSSPNWFFCEENMLPVEVIDNGLSALANACPNLRRVQVIGASEMGLLSVAEECPTLQELELQKCSDNVLRGIAACGNLQILKLVGNVDGFYGSVVSDIGLTILAQGCKRLVKLELCGCEGSFDGIKAIGKCCQMLEELTLSDHRMDDGWLAGVSYCENLKTLRLTSCKKIDLNPGLEEYLGSCPALERLHLQKCQLRDKKSVSALFSVCRAAREIIIQDCWGLDNGLFGFATVCRRVKLLYVEGCSLLTTEGLESVIHSWKELQSLRVVSCKHIKDSEISPSLATLFTTLKELKWRPDTKSLLPSSLRGISMGKKGGKFFKRT* 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g1204 498 SMART LRR_CC_2 409 434 IPR006553 -
Tpr4g1204 498 SMART LRR_CC_2 228 250 IPR006553 -
Tpr4g1204 498 SMART LRR_CC_2 358 383 IPR006553 -
Tpr4g1204 498 SMART LRR_CC_2 282 306 IPR006553 -
Tpr4g1204 498 MobiDBLite consensus disorder prediction 1 25 - -
Tpr4g1204 498 Gene3D Ribonuclease Inhibitor 240 475 IPR032675 -
Tpr4g1204 498 Gene3D - 82 119 - -
Tpr4g1204 498 SUPERFAMILY RNI-like 242 469 - -
Tpr4g1204 498 SUPERFAMILY F-box domain 83 139 IPR036047 GO:0005515
Tpr4g1204 498 MobiDBLite consensus disorder prediction 1 26 - -
Tpr4g1204 498 PANTHER F-BOX PLANT-LIKE PROTEIN 63 479 - -
Tpr4g1204 498 SUPERFAMILY RNI-like 131 261 - -
Tpr4g1204 498 Pfam F-box domain 85 116 IPR001810 GO:0005515
Tpr4g1204 498 PANTHER UNCHARACTERIZED 63 479 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g1204 Tpr-Chr4 11570050 11572823 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g1204 K10268 - gmx:100812193 757.288
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g1204 4 11570050 11572823 Tpr4g1204 4 11570050 11572823 ECH