LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Tpr4g1198	ATGTCGAAGGATAAAGATCCTACCAATTTGTCTCGCACCTTCAAATACCTTTTAGCTACTCAATTCTTGTCAAGAGGAATTCCATTTATATTCAATACATGGATTGTAAGGCATCTCACAGAAGAGGACTACGCGATGTATGCAGTGCAGTTTCATCTATTTGTCACATGTGTTTTATTTCTTAGCCGGGAGGGCTTCCGGCGAGCATGCATGAGAATGGATATGAAACGTGATGGTACTTCAATTGAAGAAGATGTCGGGAGGCTAATGAAAGTAGCATGGATGAGTCTCCCACTTGGAATATTTGTTACCATTGTAGCATGCCTTTTTGTCTTCTGGTGGCAACAAATAAGTTATTTTAGTCCATATGGGCAAGCTGTCTTGATCAATGGTTGTGCCTGTATTTTGGAGCTTTTGGCCGAGCCTTTGTATATTCTTTCTCAGACCTTGGTCTTGCTTGAATTACGGTTGTTGGTTGAGACAGTAGCTACCTTCTCACGGTGCTTGACAATGTACTTTTTAATTGTCAAGCTAACTGGAATGGAAAAATCAATCATATTTGCGCTGTCACAGTCTGCTTATGGAGCTTGCTTATTTCTTGGTTATTGGGGCTATCTGGTTATTTTTCGGAAATTCAGATATTCTTACCTTTTCCCATTCAGAAAAGGAAAAGTTATTGGATTTGACCAGCAGCTGTCCAAGATGTGTATGCTGTTTACCTTTCAATCCTTTCGAAAGTTGGTGCTTCAGGAAGGAGAGAAGATAGTGCTTGTGTGGTTTGATACACCATATAATCAAGCTGTATATGGCCTCGTAGATAAATTAGGTAGCTTAGTGGTGAGACTTGTCTTTTTACCATTTGAAGAAAGTTCATATACAGCATTTGCAAGGTCTGCTTCAGGAGAATACCCAGGAAAACACAAGAAATTAGGAAACTGCTTGACAGAATCCCTCAAGTTAGTTTTGTTGATTGGCGTTGTTTTCATGGCATTTGGTCCAAGTTATTCTTATTCCCTCATTAGATTGTTGTATGGAAAAAAATGGAGTGATGGAGAAGCATCAACTGTCCTCCGCTATTATTGCTTTTATGTCATTGTTTTGGCAATGAATGGAACATCTGAAGCCTTTATGCATGCAGTTGCAACAGAGAGCCAACTCAAGCGTTCAAATGATTCATTACTTGTATTCTCTTTGATCTCTGTCGTTCTGAATGTCCTACTAATAAAGCTATATGGGTCAGTTGGCTTGATCATGGCAAATTCTCTCAATATGAGTTTGAGGATTTTATATTCTGCAATGTTCATAAAGGATTATTTCAAGGGATCTTCCTCGTTTTCTTTTCGTGGCTGCTTGCCTTCAGGATGGGTTATTCTGTTACTTTCAAGTGTAATCACTCTCATTTCTGAGAATGTATTTTTGGACCAAGATAATTTCTGGCCAACATTTATGATCCATTTCTCTGTTGGGTTGGCTTGCTTCTGTGTGTCATCATATGTGATCTACTGTCGGGAAAAACCTTTCATCAAGAAAATTATTCGCTTTCGTGATCACTCGGACTGA	1560	0.3904	MSKDKDPTNLSRTFKYLLATQFLSRGIPFIFNTWIVRHLTEEDYAMYAVQFHLFVTCVLFLSREGFRRACMRMDMKRDGTSIEEDVGRLMKVAWMSLPLGIFVTIVACLFVFWWQQISYFSPYGQAVLINGCACILELLAEPLYILSQTLVLLELRLLVETVATFSRCLTMYFLIVKLTGMEKSIIFALSQSAYGACLFLGYWGYLVIFRKFRYSYLFPFRKGKVIGFDQQLSKMCMLFTFQSFRKLVLQEGEKIVLVWFDTPYNQAVYGLVDKLGSLVVRLVFLPFEESSYTAFARSASGEYPGKHKKLGNCLTESLKLVLLIGVVFMAFGPSYSYSLIRLLYGKKWSDGEASTVLRYYCFYVIVLAMNGTSEAFMHAVATESQLKRSNDSLLVFSLISVVLNVLLIKLYGSVGLIMANSLNMSLRILYSAMFIKDYFKGSSSFSFRGCLPSGWVILLLSSVITLISENVFLDQDNFWPTFMIHFSVGLACFCVSSYVIYCREKPFIKKIIRFRDHSD*	520

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Tpr4g1198	519	CDD	MATE_rft1	9	441	-	-
	Tpr4g1198	519	PANTHER	ENDOPLASMIC RETICULUM MULTISPAN TRANSMEMBRANE PROTEIN-RELATED	4	518	IPR007594	GO:0006488\|GO:0016021
	Tpr4g1198	519	Pfam	Rft protein	13	512	IPR007594	GO:0006488\|GO:0016021

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Tpr4g1198	K06316		-	gmx:100817452	859.366

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Tpr4g1198	4	11477437	11487824	Tpr4g1198	4	11477437	11487824	ECH