Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g1197 ATGCCTCTCCTAACTTTCCCGCATTTTCCTTCCAATTTTCCCTCACTTTCCCGCTTCCCTAACAACCGCCGTTTCTCTCCAACTCACCGTTGTTGCTCGACCGCACCATCATCCGCCGACACCGCCATTCTCTGGTTCAAGCACGATCTCCGAACAGACGACCACCCTGGACTCCTCGCAGCCTCCAAATTTCAATCCATTGTTCCTGTTTACGTCTTCGATCACCGCATCCTTTCTCGTTTTTCCGATGAAATGCTTGAACTGGTTCTGTTCGCTTTGCAAGATTTGAGGGAGTCGTTGCGTGATCGTGGTTCCGATCTCATGGTTAGGTTTGGCAATGCTGAGAATGTCATACAGAACCTTGCAGCAGAGGTCCAAGCCACTTGTATATTTGTGGAACAAGAGGTGGAGTATGAACTGCTCTTTATCATGGATGTTGTCAACCAGCGTTTGAATTCGATGAAGGTTTCACAAGACACTCCAAGAATTGAATTGTGGAAGACTCCATTTTATGATATAAAGGTGCTGCAAAATCTTGCTGCATCGTATGACGACTTTGAGAAACTCCGGCTCCATGTAACTACACCTCTTCAGCTTTCAACACTACCTGGTGCAGAAATGGAACTAGACTGGGGTGATCTTCCCGCGTATGATGATGTTAAGGGATTTATGGCTAAGAACCAACATAAATCAAGTGATGATTGGACTTTGATCAAGGAGACATCAGCTGAAACCTTGTTAGGCAGAGAAATGTTGAAGTCTAGTGAGAGCGGGGAAAGAAGTTATAGCTTTAGACAGATGCAGTCAAGGGAATCAAATGAATCTGTGTTTGTTACACAAAAAGGAAATGTTGTAGGAGGTGGAACATATAATGTACTAAATGCATTGGCTGCATATTTGAGGTATTTGGAGGGAACGGCTCGTGAGGATTGGCAAGAGGTACATGCAAAACTGCGTGCTTCAGAAAGTCGAAATGGAGCATCGTTTAACGCACTATTTGGTCCTGCCCTGTCTCTGGGCATTATATCTAGAAGAAGAGTACACTATGAAGCTATCAAATATGAGAAAGAACGAAATGGTGGATTCTTACCTCCCTTTGGATATTCAACTGCCACCATTGAAGCAGCAGTTGAGGCTGTGTTTTCAAAGGAGTGGTATTGGCTTTTGGCTTTGAGAAATCAAATAAATAATGATGAAAAACAGTCAACACGGATATGGAGATGGAATGGTTTTCTTATTCAGTATACAGTTGCCGGTGAAGAGGGTCCTGCTGTTCTTCTTGTGCATGGTTTTGGTGCCTTTGCAGAGCACTACCGTGACAACATACACGATTTAGCTAGAGCTGGAAATCGAGTTTGGGCTATTACATTGTTAGGATTTGGCAAATCTGAAAAGCCAAATATTTTATACACTGAGCTCTTGTGGGCTGAACTATTGAGAGATTTTATTGTTGATGTTGTGGGGGAACCAGTTCACCTTGTTGGCAACTCAATTGGTGGTTACATTGTTGCTATTGTTTCTCGAGTTTGGAGTGTTTTGATCAAATCCACCGTCTTGATCAACAGTGCTGGCAATGTTATCCCAAGAAATACATCCTTATCATTGTCTAGGCCAAGTGATAGACAAACGTCAGGGGCTACATGGTTGGGTTCTCGCATTCTTCTATTTTTCTTGAGGCTAACAATTCAAGACACTGTTAAGAAATGTTATCCAACTAAGGTTGAAAGGGCAGATGATTGGCTCATAAATGAAATGCTAAGAGCATCTTATGACCCTGGTGTGCCTGTGGTCTTGGAAAGCATCTTTAGCTTTAATCTTTCCATACCTCTTAACTATCTTCTCGAAGATGTCAAGGAAAAGGTTCTAATTATACAGGGAATGAAAGATCCAATTTCTGACTCCAATGCCACCATAGCTATGCTTAAAGAGCACTGTGATGGTGTTATAATCAAGGAATTAGATGCCGGCCATTGTCCCCATGATGAGGTGCCAGAATCGGTCAATACTATCATTTGTGGTTGGATACAAAAGGTGGAAAGTAACATTTTAGCAGGGTTCCCAGTGTAA 2067 0.4267 MPLLTFPHFPSNFPSLSRFPNNRRFSPTHRCCSTAPSSADTAILWFKHDLRTDDHPGLLAASKFQSIVPVYVFDHRILSRFSDEMLELVLFALQDLRESLRDRGSDLMVRFGNAENVIQNLAAEVQATCIFVEQEVEYELLFIMDVVNQRLNSMKVSQDTPRIELWKTPFYDIKVLQNLAASYDDFEKLRLHVTTPLQLSTLPGAEMELDWGDLPAYDDVKGFMAKNQHKSSDDWTLIKETSAETLLGREMLKSSESGERSYSFRQMQSRESNESVFVTQKGNVVGGGTYNVLNALAAYLRYLEGTAREDWQEVHAKLRASESRNGASFNALFGPALSLGIISRRRVHYEAIKYEKERNGGFLPPFGYSTATIEAAVEAVFSKEWYWLLALRNQINNDEKQSTRIWRWNGFLIQYTVAGEEGPAVLLVHGFGAFAEHYRDNIHDLARAGNRVWAITLLGFGKSEKPNILYTELLWAELLRDFIVDVVGEPVHLVGNSIGGYIVAIVSRVWSVLIKSTVLINSAGNVIPRNTSLSLSRPSDRQTSGATWLGSRILLFFLRLTIQDTVKKCYPTKVERADDWLINEMLRASYDPGVPVVLESIFSFNLSIPLNYLLEDVKEKVLIIQGMKDPISDSNATIAMLKEHCDGVIIKELDAGHCPHDEVPESVNTIICGWIQKVESNILAGFPV* 689
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g1197 688 SUPERFAMILY Cryptochrome/photolyase, N-terminal domain 41 203 IPR036155 -
Tpr4g1197 688 SUPERFAMILY alpha/beta-Hydrolases 400 678 IPR029058 -
Tpr4g1197 688 Pfam Alpha/beta hydrolase family 425 667 IPR000073 -
Tpr4g1197 688 PANTHER DNA PHOTOLYASE 29 682 - -
Tpr4g1197 688 ProSiteProfiles Photolyase/cryptochrome alpha/beta domain profile. 40 173 IPR006050 -
Tpr4g1197 688 Gene3D alpha/beta hydrolase 390 681 IPR029058 -
Tpr4g1197 688 Gene3D HUPs 24 184 IPR014729 -
Tpr4g1197 688 Pfam DNA photolyase 43 155 IPR006050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g1197 Tpr-Chr4 11467072 11473249 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g1197 - - gmx:100813721 1064.29