Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g1189 ATGGTTCTTTCTCAAAAGCTTCACGAAGCTTTCAAAGGCACTGTCGAGAGAATCACAGGCCCAAGAACCGTTTCTGCTTTCAAAGAAAAAGGAGTTCTTAGTGTCTCCGAATTCATCATCGCCGGTGATAATCTCGTTGCCAAATGCCCTACTTGGTCATGGGAATCAGGAGCAAGCAAGAGGAAGACATATTTACCATCCGAGAAACAATTCTTGATCACTAGGAATGTGCCTTGCCTGCGAAGAGCTGCGTCTATTGAAGAAGAATATGAAGCTGCTGGAGGGGAAGTTCTACTTGATGATGAAGATAATGATGGATGGCTAGCAACTCATGGAAAACCTAAAGAAACTAAATCTGATGAAGATGAGGATTTACCTTCCATGGAAAGTCTAGAAATCAGTAAAAGTAGTTCTATTAAGCAAAACTCTTCCCACACAGGAGGTGAGGACGATGAGGATATTCCTGATATGGCAGAGTTTGCAGAATATGACAACATTATTGAGACAGATCCTTCTACATATCTAGTAGCACATGAACCAGATGATGACAATATTCTACGGACCCGCACCTATGACATCAGCATCACGTATGATAAGTATTATCAAACACCTCGTGTGTGGCTTACTGGGTACGATGAGTCAAGAATGCTACTGCAACCGGAACTTGTCCTTGAAGATGTTAGTCAAGACCATGCACGCAAAACGGTAACAATTGAAGACCACCCTCACTTGCCTGGGAAGCATGCATCTATTCATCCATGTCGACATGGAGCAGTGATGAAGAAAATCATTGATGTGTTGATGTCACGTGGAGTTGAGCCTGAAGTTGACAAGTACCTATTCTTGTTCTTGAAATTTATGGCCTCGGTAATTCCAACTATTGAGTATGATTACACCATGGACTTTGATCTTGGTAGCTCCAGCAATTGA 930 0.4226 MVLSQKLHEAFKGTVERITGPRTVSAFKEKGVLSVSEFIIAGDNLVAKCPTWSWESGASKRKTYLPSEKQFLITRNVPCLRRAASIEEEYEAAGGEVLLDDEDNDGWLATHGKPKETKSDEDEDLPSMESLEISKSSSIKQNSSHTGGEDDEDIPDMAEFAEYDNIIETDPSTYLVAHEPDDDNILRTRTYDISITYDKYYQTPRVWLTGYDESRMLLQPELVLEDVSQDHARKTVTIEDHPHLPGKHASIHPCRHGAVMKKIIDVLMSRGVEPEVDKYLFLFLKFMASVIPTIEYDYTMDFDLGSSSN* 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g1189 309 Gene3D - 154 294 - -
Tpr4g1189 309 MobiDBLite consensus disorder prediction 130 144 - -
Tpr4g1189 309 Pfam Autophagocytosis associated protein, active-site domain 37 298 IPR007135 GO:0019787
Tpr4g1189 309 PANTHER UBIQUITIN-LIKE-CONJUGATING ENZYME ATG3 1 304 IPR007135 GO:0019787
Tpr4g1189 309 MobiDBLite consensus disorder prediction 104 124 - -
Tpr4g1189 309 MobiDBLite consensus disorder prediction 95 155 - -
Tpr4g1189 309 PANTHER UBIQUITIN-LIKE-CONJUGATING ENZYME ATG3 1 304 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g1189 K08343 - twl:119984566 553.903