Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g1173 ATGTGGAAACGCGCAACCGCTACTCTCAAATCATCCCTTTCTCTTCACATCACAAAGGAAGCTTCTAAATATAACGCTTTTCATTCCCATAGATTTATCTCAGGATCGCCTTTACACTTTCAGGAAATGGATGGGATTTGTCCCAAACATGTCGATTCGGTTATAACTTTTGTTTTAGGAGGGCCGGGTAGTGGAAAAGGTACTCAATGTGCAAGAATTGTTGAAACATTCGGATTTAAGCATCTGAGTGCTGGTGATCTCTTGAGGAAGGAGGTGGAATCTGCTAGTGAATACGGCACAATGATTCTGGATACAATTCGAGAAGGGAGAATTGTTCCATCAGCAGTGACTGTCAAATTGATTCTAAGAGAGATGGAATCTAGCGATAATCATAAGTTTCTTATTGATGGTTTCCCTAGAAGTGAGGAGAATCGCATAGCTTTTGAACGAATTACTGGATCAGAACCAGATTTTGTTCTTTTCTTTGATTGCCCTGAAGAAGAGATGGTGAAACGGGTGCTGAGCCGTAATCAGGGTCGAATTGATGACAATATAGATACAATCAAGAAACGTCTTAAAGTATTTGAGGCATTAAATCTTCCTGTGGTTGATCATTATGAAAGGAGAGGGAAACTTCACAGGATCAATGCTGTGGGAACAGAGGATGAAATATTTGAGCAAGTTCGGCCAGTTTTTGCGGCATGTGAGCTAACGGCTGCATGA 723 0.4108 MWKRATATLKSSLSLHITKEASKYNAFHSHRFISGSPLHFQEMDGICPKHVDSVITFVLGGPGSGKGTQCARIVETFGFKHLSAGDLLRKEVESASEYGTMILDTIREGRIVPSAVTVKLILREMESSDNHKFLIDGFPRSEENRIAFERITGSEPDFVLFFDCPEEEMVKRVLSRNQGRIDDNIDTIKKRLKVFEALNLPVVDHYERRGKLHRINAVGTEDEIFEQVRPVFAACELTAA* 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g1173 240 Gene3D - 52 234 IPR027417 -
Tpr4g1173 240 TIGRFAM UMP_CMP_kin_fam: UMP-CMP kinase family 55 232 IPR006266 GO:0004127|GO:0006207|GO:0006221|GO:0009041
Tpr4g1173 240 Hamap Adenylate kinase [adk]. 54 233 IPR000850 GO:0005524|GO:0006139|GO:0019205
Tpr4g1173 240 Pfam Adenylate kinase 58 210 - -
Tpr4g1173 240 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 55 231 IPR027417 -
Tpr4g1173 240 CDD ADK 57 224 IPR000850 GO:0005524|GO:0006139|GO:0019205
Tpr4g1173 240 PRINTS Adenylate kinase signature 57 70 IPR000850 GO:0005524|GO:0006139|GO:0019205
Tpr4g1173 240 PRINTS Adenylate kinase signature 85 99 IPR000850 GO:0005524|GO:0006139|GO:0019205
Tpr4g1173 240 PRINTS Adenylate kinase signature 133 149 IPR000850 GO:0005524|GO:0006139|GO:0019205
Tpr4g1173 240 PRINTS Adenylate kinase signature 180 195 IPR000850 GO:0005524|GO:0006139|GO:0019205
Tpr4g1173 240 PRINTS Adenylate kinase signature 197 211 IPR000850 GO:0005524|GO:0006139|GO:0019205
Tpr4g1173 240 PANTHER NUCLEOTIDE KINASE 54 233 IPR000850 GO:0005524|GO:0006139|GO:0019205
Tpr4g1173 240 Hamap UMP-CMP kinase [CMPK1]. 53 235 IPR006266 GO:0004127|GO:0006207|GO:0006221|GO:0009041
Tpr4g1173 240 ProSitePatterns Adenylate kinase signature. 133 144 IPR033690 -
Tpr4g1173 240 PANTHER UMP-CMP KINASE 54 233 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g1173 Tpr-Chr4 11222373 11227005 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g1173 K13800 - gmx:100777369 345.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g1173 4 11222373 11227005 Tpr4g1173 4 11222373 11227005 ECH