Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g1166 ATGAAGAGAATTGTAAAAAATGAGATTGTGATTGTTGGAGGTGGTATATGTGGCCTTGCAACAGCCCTTGCCCTTCATAGGAAGAAAATAAAAAGTTTGGTGTTAGAAAAATCGGAGGAGTTAAGAGCTACAGGGGCAGCTATAATTGTGCAAGCTAATGGATGGCATGCACTTGATCAGCTTGGTGTTGGTTCAATGCTTAGACAAACTGCCATTCAGATACAAGGGGGAAAATTCATATCTATAAGTGAGGATGAGCAAAAGGAAGTAGCATTTGGGATTAATCAAGAATTTAGGTGCTTAAAGCGCACTGATTTGATCAAAGCCATAGCCAATTGTTTGCCTATGGAAACTATAAGAACTAGCTGTCAAGTAGTTTCTATAGAATTAGATTCAGCTACACACTATCCACAGCTTCTGCTTAGCAATGGAAGTATCCTTCAAGCCAAGGTTGTTATTGGATGTGATGGTGTGAATTCTATCATAGCAAATATGGTTGGACTACACCAAACAAAGCTCTTGCGTTTCTCTACATGTGTTGCTAGAGGCTTCACAAAGTACCCAAATGGTCATCAATTTCCTAGTGAGTTTGCTGTTATAAGCAGAGGTCAAGTCCAACTTGGAAGGATCCCAATGACTCACAAGCTTGTTTACTGGTTTGTAACAAGGCTCAGCACTTCTCAAGATTCAACAATTTCAAAAGATTCAAATCTTATCAGACGATCTTTATTGGAATCAATGGAGGGTTTTCCAATACATGCAATGGACATGATACGAAGTTGCAAGTTGAACTCTTTGCATCATACTGACTTGAAGTATCGTCCGCCATGGGATTTGCTTCTTAACAAATTCCATAAAGGAACGATAGTAGTTGCTGGCGACGCAATGCATGCCACTGGTCCATTCATTGCACAAGGTGGCTCAGCCTCGATCGAAGATGCCATTGTTCTAGCTAGATGTCTAGCACAAAAGATGCATAATACGAAGAACATGATGATAGGACGATGTATTGTATCAGAAGCATTCGATAAATATGTGAAAGAAAGGAGGATGCGAATCTTTTGGCTCTCTTTAAATACTTTCCTTGTTGGGAAAAAGCTTGATACTAAATCATGGATAGTGAGATTGATAGTCATTGCAATCATGGTTGTTCTATTCAGAGATCGAGATTGCCATTCGCGTTATAATTGTGGAACTCTACGTGAAGAGGAAGGTGATTACATATAA 1227 0.3936 MKRIVKNEIVIVGGGICGLATALALHRKKIKSLVLEKSEELRATGAAIIVQANGWHALDQLGVGSMLRQTAIQIQGGKFISISEDEQKEVAFGINQEFRCLKRTDLIKAIANCLPMETIRTSCQVVSIELDSATHYPQLLLSNGSILQAKVVIGCDGVNSIIANMVGLHQTKLLRFSTCVARGFTKYPNGHQFPSEFAVISRGQVQLGRIPMTHKLVYWFVTRLSTSQDSTISKDSNLIRRSLLESMEGFPIHAMDMIRSCKLNSLHHTDLKYRPPWDLLLNKFHKGTIVVAGDAMHATGPFIAQGGSASIEDAIVLARCLAQKMHNTKNMMIGRCIVSEAFDKYVKERRMRIFWLSLNTFLVGKKLDTKSWIVRLIVIAIMVVLFRDRDCHSRYNCGTLREEEGDYI* 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g1166 408 Gene3D - 7 375 IPR036188 -
Tpr4g1166 408 PANTHER FAD/NAD(P)-BINDING OXIDOREDUCTASE FAMILY PROTEIN 2 400 - -
Tpr4g1166 408 Pfam FAD binding domain 8 326 IPR002938 GO:0071949
Tpr4g1166 408 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 8 30 - -
Tpr4g1166 408 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 148 163 - -
Tpr4g1166 408 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 286 301 - -
Tpr4g1166 408 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 301 317 - -
Tpr4g1166 408 SUPERFAMILY FAD/NAD(P)-binding domain 8 383 IPR036188 -
Tpr4g1166 408 PANTHER FAD/NAD(P)-BINDING OXIDOREDUCTASE FAMILY PROTEIN 2 400 IPR044560 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g1166 Tpr-Chr4 11151728 11154931 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g1166 7 403 Miscellaneous Gene Families AT5G05320 35.854 2.01e-73 233
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g1166 - - mtr:MTR_4g035655 688.337