Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g1157 ATGAGGGTAAAGCCAGCTTCAGCAAAAACCATTTTGTTCCTATGCATTGCTTGCTTTCTGGCTGGAACACTTTTCACTGGCCAAATGTGGACAAGCCCCTCCTCCAACCATGAAAGTTCGGTGCTACCGACCAGACACAACGGTGTTCTCAAACGAAAAATCATTGAAGGTGAATCCGGAGATGTAATGGAGGAAGTCACAAAGACTCATCAAGCTATCAAGTCTTTGGATAAGGCAATTTCAACATTGGGAATGGAATTGACAGCATCTGAGACAAGCCAAACTAGTGGGCAGGGGCAGCATTTGAAACAACATGATTCTAACCTTAGTATTCAGAGAGCTTTTGTGGTGATTGGTATTAACACCGCCTTTAGCAGCAAAAAACGACGAGACTCGATACGCGAGACATGGTTGCCTAAAGGAGATAAGCTTAAGGAACTAGAGAAAGAGAAGGGAATTGTTGTAAGGTTCATGATTGGTCATAGCACATCACTAGGAAGCATTCTTGACAAATCAATTGATGAAGAAGATACAGAACACCATGATTTTCTTAGGTTAGACCATATTGAGGGGTACCATGAATTGTCCACCAAGACAAGACTCTTCTTTTCAACTGTTACTTCTATGTGGGATGCTGAATTCTATGTCAAGATTGATGATGACATTCATTTAAACCTTGGTACGCTAGTGAACACACTTGCAAAGTACCGATCAAGGCCCAGGGTTTATATTGGTTGCATGAAATCCGGTCCAGTTTTATATCAAAAAGGTGTAAAGTATCATGAAGCTGAGTATTGGAAGTTTGGGGATGAAGGGAACAAATATTTCAGGCATGCCACAGGACAAATCTATGCCATCTCTAGGGATCTTGCTGACTATATATCCATCAATTGGCCCATATTGCATAGATATGCAAATGAAGATGTATCTCTTGGAACATGGTTATTGGGCTTAGAAGTTGAAATGGTTGATGAACGTTCCATGTGTTGTGCGACACCCCCAGATTGTGAATGGAAAGCAAGGGCAGGAAACGTGTGTGTGGCTTCATATGATTGGAAATGCAGTGGCATATGCAAGTCTGATGAGAGAATGAAAGATGTTCACAAAGCTTGTGGAGAGGGAGATGGAGCTGTTTGGAATGTTGAAATATAA 1152 0.4158 MRVKPASAKTILFLCIACFLAGTLFTGQMWTSPSSNHESSVLPTRHNGVLKRKIIEGESGDVMEEVTKTHQAIKSLDKAISTLGMELTASETSQTSGQGQHLKQHDSNLSIQRAFVVIGINTAFSSKKRRDSIRETWLPKGDKLKELEKEKGIVVRFMIGHSTSLGSILDKSIDEEDTEHHDFLRLDHIEGYHELSTKTRLFFSTVTSMWDAEFYVKIDDDIHLNLGTLVNTLAKYRSRPRVYIGCMKSGPVLYQKGVKYHEAEYWKFGDEGNKYFRHATGQIYAISRDLADYISINWPILHRYANEDVSLGTWLLGLEVEMVDERSMCCATPPDCEWKARAGNVCVASYDWKCSGICKSDERMKDVHKACGEGDGAVWNVEI* 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g1157 383 Gene3D - 103 335 - -
Tpr4g1157 383 Pfam Domain of unknown function (DUF4094) 7 90 IPR025298 -
Tpr4g1157 383 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 5 374 IPR002659 GO:0006486|GO:0016020|GO:0016758
Tpr4g1157 383 Pfam Galactosyltransferase 128 324 IPR002659 GO:0006486|GO:0016020|GO:0016758
Tpr4g1157 383 PANTHER BETA-1,3-GALACTOSYLTRANSFERASE 8-RELATED 5 374 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g1157 Tpr-Chr4 11075337 11081560 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g1157 7 380 Glycosyltransferase AT1G77810 60.052 4.79e-175 491
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g1157 K20855 - gmx:100776291 628.632
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g1157 4 11075337 11081560 Tpr4g1157 4 11075337 11081560 ECH