Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g1149 ATGAGTTCTAACATCATGAATTTCTCTACCACTTCTTCATCATCATCGTTAATCAGAGTGTTTAATCCAACTCCAAATAATAATCATAATCATAAGCTACAAAAACCGCGTTCATATTCTTCTTCTTCATTTTCAGTTACTATTTCTCACCACCATCACCACCACCGTCAACTTTCTCTCCGTTCTTCTTCGCGATCCCTTTCTCATTCTTCTACGGTTGTGAAGGCGGCGGTACAGACGGAAGAGCCACTTCATGTTATGATTTCCGGTGCACCTGCTTCTGGTAAAGGAACTCAATGTCACCTTATTACTAACAAATACGGTTTGGTGCACGTTGCTGCTGGAGATTTATTAAGGGCAGAAATTGAAACCGGAAGTGAAAATGGAAAGCGTGCGAAAGAATATATGGAGAAGGGACAGTTGGTACCTGATGAAATAGTTGTCATGATGGTCAAGGATCGTCTCTTGAAGCCAGATTCTGCAGAGAAGGGTTGGCTTTTGGATGGATATCCCAGGAGCTTATCACAGGCTACTGCACTTAAGGAATTAGGGTTTAAACCTGATATATTTATTCTTTTAGAGGTTTCCGAAGATACTCTTGTGGAGAGAGTAGTTGGAAGGAGGTTAGATCCTGTTACTGGGAAGATATATCATTTGAAGTATTCTCCTCCAGAAACAAAAGAAATTGCAGATAGGCTTACCCAACGTTTTGATGATACTGAAGAGAAGGTAAAGTTGCGATTGAACACCCACCATCAAAATGTAGAGGCTGTCCTTTCAATGTACAAAGATATAACCATTAAGATTAATGGAAATGCTTCTCAGAAGGAAGTATTTGCTCAAATTGATGGTGCACTTACAACTCTTCTAGAGCAAAGGAAAACATCTTCAGAATCTATGGTAGCATAG 909 0.3982 MSSNIMNFSTTSSSSSLIRVFNPTPNNNHNHKLQKPRSYSSSSFSVTISHHHHHHRQLSLRSSSRSLSHSSTVVKAAVQTEEPLHVMISGAPASGKGTQCHLITNKYGLVHVAAGDLLRAEIETGSENGKRAKEYMEKGQLVPDEIVVMMVKDRLLKPDSAEKGWLLDGYPRSLSQATALKELGFKPDIFILLEVSEDTLVERVVGRRLDPVTGKIYHLKYSPPETKEIADRLTQRFDDTEEKVKLRLNTHHQNVEAVLSMYKDITIKINGNASQKEVFAQIDGALTTLLEQRKTSSESMVA* 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g1149 302 Pfam Adenylate kinase 88 264 - -
Tpr4g1149 302 PANTHER NUCLEOTIDE KINASE 42 293 IPR000850 GO:0005524|GO:0006139|GO:0019205
Tpr4g1149 302 MobiDBLite consensus disorder prediction 25 66 - -
Tpr4g1149 302 ProSitePatterns Adenylate kinase signature. 165 176 IPR033690 -
Tpr4g1149 302 Gene3D - 80 300 IPR027417 -
Tpr4g1149 302 MobiDBLite consensus disorder prediction 25 47 - -
Tpr4g1149 302 PRINTS Adenylate kinase signature 87 100 IPR000850 GO:0005524|GO:0006139|GO:0019205
Tpr4g1149 302 PRINTS Adenylate kinase signature 115 129 IPR000850 GO:0005524|GO:0006139|GO:0019205
Tpr4g1149 302 PRINTS Adenylate kinase signature 165 181 IPR000850 GO:0005524|GO:0006139|GO:0019205
Tpr4g1149 302 PRINTS Adenylate kinase signature 236 251 IPR000850 GO:0005524|GO:0006139|GO:0019205
Tpr4g1149 302 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 83 289 IPR027417 -
Tpr4g1149 302 Hamap Adenylate kinase [adk]. 84 287 IPR000850 GO:0005524|GO:0006139|GO:0019205
Tpr4g1149 302 PANTHER ADENYLATE KINASE 8 42 293 - -
Tpr4g1149 302 TIGRFAM adk: adenylate kinase 86 285 IPR006259 GO:0004017|GO:0005524|GO:0016776
Tpr4g1149 302 CDD ADK 86 278 IPR000850 GO:0005524|GO:0006139|GO:0019205
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g1149 Tpr-Chr4 10980280 10985700 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g1149 K00939 - gmx:100784319 385.571