Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g1140 ATGGCTGAGGAACCTCAAAAACCAACTGAACAAGTGGCTACAACACCAGCCACATCTGAAACTACCATTGAAAAGACGCCGCCACCACAGGCTGAAGAAGTTGTAGCCGCCGCCGCCGACGCTGACGCCGTTGTTGTTCCTCCTGTTGTTGCTGAAGAGACAGAGAAGCCGGCTGAGGATGTTAAACCTGCTGATGAGACTGCCGCTGCTACCGATAAGAAGATTTTGCAGTCGGTTTCTTTTAAGGAAGAAACTAACGTGGTTTCTGAATTACCTGAATCTCAGAAAAAAGCACTTGATGAACTTAAACAGCTTATTCAAGAAGCGCTTAATAAACATGAGTTTACTGCTCCTCCACCGCCGCCGCCAACTAAAGCTGTTGCTGAAGTAGCCGAGGAGAAAAAACCTGAAGAAGAAAAGAAAACTGAAGACGTAGTTGCTGAAGAGAAAAAGGTTGAAGAAGTAGTTGCTGAAGAGAAAAAGGTTGAAGAAGCAGTTGCTGAAGAGAAAAAGGTTGAAGAAGCAGTTGCTGAAGAGAAAAAGGTTGAAGAAGTTGAAAAGAAGGAAGAAGAAAAAGGTTCAAGTTCTGAGGAACCTAAAACCGAAGCTAAAATTGAAGCCGAACCTGAAGCGAAGAAAGAGGAGAGTGTCTTAGAGGTTGTTGAGAAAATAGCGACAAGTACCGAAGAAGACGGTGCAAAAACGGTTGAAGCTATTCAAGAAAGTATAGTATCCGTTACGGTTACTGACGGTGAACAACCTGTAACTGAAACTGTTGGTGAAGCTGTTGCTGTTGCTGAGGTGGAAGTTACTCCTACTACACCAGAAGAAGTTGAAATATGGGGAATTCCGTTACTAGCTGATGAAAGAAGCGATGTGATTCTTTTGAAATTCCTCAGAGCTAGGGATTTTAAGGTCAAAGAAGCTTACACAATGATCAAACAAACAGTGATTTGGCGAAAGGAATTCGGAATTGAAGCACTTCTTCAAGAAGATCTTGGAACTGATTGGGACAAAGTTGTTTTCACTGATGGTTATGACAAAGAAGGTCACCCTGTTTATTACAATGTTTTTGGTGAGTTTGAGAACAAAGAATTGTATCAAAACACTTTCTCCGATGATGAGAAGAGAACCAAGTTTATTCGTTGGAGGATTCAGTCTTTGGAGAAAAGCATTAGAAAACTCGACTTCACTCCATCTGGTATCTCTACTATTGTTCAAGTTAATGATCTTAAGAATTCTCCTGGACTTGGTAAGAAGGAGCTTAGACAAGCTACTAACAAGGCTCTTCAATTGCTTCAAGACAATTATCCTGAATTTGTAGCCAAACAGGTTTTTATCAATGTTCCTTGGTGGTACCTTGCCTTTTCTAGGTTTTTAAGTGCTTTCTTGACACAGAGGACTAAGAGCAAATTTGTATTTGCTGGACCCTCCAAATCTGCTGATACCCTTTTCAAATATATTGCTCCTGAGCAAGTGCCAGTTCAATATGGAGGACTGAGCCGAGAGGGTGAACAGGAATTCACCACTGCTGACCCTGCTACAGAGGTTACTATCAAACCAGCAACAAAACATGCTGTTGAGTTCCCAATTTCTGAGAAAAGCACTTTGGTTTGGGAAGTAAGAGTTGTGGATTGGAGTGTGAACTATGGAGCTGAATTTGTGCCGAGTGCTGAAGACGGATACACTGTGATTATCCAGAAGAACAGGAAAGTTGCTCCAGCTGATGAAACAATAATTAGCAACACCTTCAAAATTGGTGAACCTGGTAAGGTTATACTCACCATAGATAACCAATCATCTAAGAAAAAGAAGCTCCTTTACAGGTCCAAGACCATACCAATCTCTGAGTAA 1854 0.4159 MAEEPQKPTEQVATTPATSETTIEKTPPPQAEEVVAAAADADAVVVPPVVAEETEKPAEDVKPADETAAATDKKILQSVSFKEETNVVSELPESQKKALDELKQLIQEALNKHEFTAPPPPPPTKAVAEVAEEKKPEEEKKTEDVVAEEKKVEEVVAEEKKVEEAVAEEKKVEEAVAEEKKVEEVEKKEEEKGSSSEEPKTEAKIEAEPEAKKEESVLEVVEKIATSTEEDGAKTVEAIQESIVSVTVTDGEQPVTETVGEAVAVAEVEVTPTTPEEVEIWGIPLLADERSDVILLKFLRARDFKVKEAYTMIKQTVIWRKEFGIEALLQEDLGTDWDKVVFTDGYDKEGHPVYYNVFGEFENKELYQNTFSDDEKRTKFIRWRIQSLEKSIRKLDFTPSGISTIVQVNDLKNSPGLGKKELRQATNKALQLLQDNYPEFVAKQVFINVPWWYLAFSRFLSAFLTQRTKSKFVFAGPSKSADTLFKYIAPEQVPVQYGGLSREGEQEFTTADPATEVTIKPATKHAVEFPISEKSTLVWEVRVVDWSVNYGAEFVPSAEDGYTVIIQKNRKVAPADETIISNTFKIGEPGKVILTIDNQSSKKKKLLYRSKTIPISE* 618
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g1140 617 ProSiteProfiles GOLD domain profile. 506 612 IPR009038 -
Tpr4g1140 617 SMART sec14_4 334 502 IPR001251 -
Tpr4g1140 617 MobiDBLite consensus disorder prediction 113 213 - -
Tpr4g1140 617 SUPERFAMILY CRAL/TRIO domain 341 501 IPR036865 -
Tpr4g1140 617 SMART CRAL_TRIO_N_2 291 316 IPR011074 -
Tpr4g1140 617 SUPERFAMILY Supernatant protein factor (SPF), C-terminal domain 515 613 IPR036598 -
Tpr4g1140 617 MobiDBLite consensus disorder prediction 128 213 - -
Tpr4g1140 617 Gene3D - 339 517 IPR036865 -
Tpr4g1140 617 MobiDBLite consensus disorder prediction 48 72 - -
Tpr4g1140 617 Gene3D GOLD domain 518 613 - -
Tpr4g1140 617 SUPERFAMILY CRAL/TRIO N-terminal domain 74 332 IPR036273 -
Tpr4g1140 617 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 330 505 IPR001251 -
Tpr4g1140 617 Coils Coil 155 192 - -
Tpr4g1140 617 PANTHER PATELLIN-1 1 617 IPR044834 GO:0008289
Tpr4g1140 617 MobiDBLite consensus disorder prediction 8 26 - -
Tpr4g1140 617 MobiDBLite consensus disorder prediction 53 69 - -
Tpr4g1140 617 Pfam CRAL/TRIO domain 339 499 IPR001251 -
Tpr4g1140 617 CDD SEC14 336 500 IPR001251 -
Tpr4g1140 617 Gene3D - 268 322 - -
Tpr4g1140 617 MobiDBLite consensus disorder prediction 1 29 - -
Tpr4g1140 617 PANTHER PATELLIN-LIKE PROTEIN 1 617 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g1140 Tpr-Chr4 10888318 10892401 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g1140 295 494 Acyl Lipid Metabolism Gene Families AT5G47730 27.103 4.99e-08 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g1140 - K19996 gmx:100794623 600.897
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g1140 4 10888318 10892401 Tpr4g1140 4 10888318 10892401 ECH