Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g1132 ATGATGAACAAATTGGTGGTGGAAGTTCATGATGCTAGTGACCTCATGCCAAAAGATGGAACAGGTTCATCTAACCCTTTTGTTCAAATAACCTTTGATGAACAAGAAGTGAAGACACAAACCAAATACAAAGACCTCAATCCTTATTTTAATGAAAAGTTTGTTTTCAACATAAACACTTCAAGAGATCTTGCTCATAAAACAGTTGAAGTTTCTGTTTACAATCACAATGAGGAAAAACCAAGTAGTAAAAAAAACTTTCTTGGAAGGGTTAGAATCTCAGGTAATTCTATTCCTTTATCTGAATCTGAATCTATTATCAAACGATACCCTCTTGAACATTCAAAAGGAGATATTGCTTTAAAAATGATTGCTTTTCATGACCCTTTTGCTAATACACCTCCTTCTCCTAAACCTCACCCTCCTCCACAACATTCACAAACAAAATCTAGTTCTTTTTTTGAAGAACATGATTCTGACCATGATGATGAAATCCCTTTGCAAGAAATAAACACTAACATAAACATGGAAGATGAAGAAATGTTTAGTGATAGTGAGAAAAAGAAGAAGAATAAGAAGAAAAAAGAAAAAGAAGTTAGAACTTTTCATTCCATTGGAACTGAGAAACCTTCTCATGGTCATGGTCATGGTCATGCTCCTGCTTCTGCTTTTCCTCCTGTTCATCAAGCTCCAAAGTTTCAATCTTTTGTGCAACCAGAAACTCAAACAAGAGTTGATTTTGCAAAATCAGGGCCACCAAATGTTATGTTAATGCAGATCCCAAAACAGAATCCAGAATATGCATTGACTGAAACAGCTCCACCACTTGCAGCTAGGTTGAGGTATAAAGGAGGGAATAAGGTATCAACAACTTATGATTTAGTTGAACAAATGCATTTTTTGTATGTGAATGTTGTGAAAGCAAAAGAACTACCTGTGATGGATATCTCAGGTAGTCTTGATCCTTATGTTGAAGTGAAACTTGGTAACTACAAAGGTGTTACAAAGCATTTGGAGAAGAATCAGCATCCTGTTTGGAAGCAAATCTTCGCCTTTTCAAAGGATAGGTTGCAATCAAATTTACTTGAAGTTACTGTGAAGGATAAAGATCTTATCAGTAAAGATGATTTTGTTGGTAGGATTATGTTTGATCTCAATGAGGTGCCGGTTAGGGTTCCGCCCGATAGTCCTTTGGCTCCTCAGTGGTATAGATTGGAAGATAAAAAGGGGATGAAGATAGAGGATGGTGAAATCATGCTTGCTGTTTGGATGGGAACACAAGCTGATGAGTCTTTTCCTGAGGCATGGCATTCTGATGCTCATAATGTTAGTCACTCAAACCTCTCGAATACACGGTCAAAGGTGTATTTTACGCCTAAGCTTTATTATCTTAGAGTTGAAGTTATTGAAGCTCAAGATTTGGTTCCTCATGATAAAGGAAGAGTTCCACAAGCTTCTGTTAGAGTTCAGCTAGGAAATCAGATGAGATTCACAGGGCCTTCTCAAATGAGAGGTATTAACCCTATTTGGAATGAGGAGCTTATGTTTGTGGCAGCAGAACCTTTTGAGGATTTTATAATTGTGACAGTTGAGGACAAATTTGGTCCTACCAATGTTGAAATCTTGGGAAGGGAGATTATGTCAGTCAGAAATGTTCCACAAAGGATGGAGACTGGAAAGCTACCGGATTCTCGTTGGTTCAATCTTCATAGGCCTAGTGCAGTCGGCGAGGAAGAAACAGAGAGAAAGAAGGAGAAATTTTCGAGTAAGATTCATCTCCGAATTTGTCTTGAGGCGGGGTATCATGTTCTTGATGAGTCCACGCATTTCAGCAGCGATCTTCAACCATCTTCGAAACACTTGAGGAAGAAAAACATTGGTTATCTTGAAGTTGGGATACTTAGTGCGCGGAATTTGCTACCTATGAAGGGAAAAGATGGTAGGACTACTGATGCATACTGTGTGGCCAAATATGGCAACAAATGGGTTAGAACAAGAACTCTGCTTGACACACTGTCCCCTAGATGGAATGAGCAGTATACATGGGAGGTTCATGATCCATGCACTGTGATCACAGTTGGTGTTTTCGACAATCACCACCTCAATGGTAGCAGTGACCACAAAGATCAGAGAATTGGAAAGGTAAGAATTAGGTTATCAACTCTTGAAACTGATAGAGTATATACTCATTTTTATCCTCTATTGGTTCTACAACCTAATGGCCTGAAGAAGAATGGAGAGCTTCATCTGGCTGTGAGGTTTACTTGCACAGCTTGGGTTAATATGGTAGCTCAATATAGTAGACCTTTGCTTCCAAAAATGCATTATGTTCAACCGATACCTGTTAGGCACATTGATTGGCTCCGCTATCAGGCCATGCAAATTGTGGCAGCAAGGCTAGCAAGAGCTGAGCCACCGCTTCGACGTGAATCAGTCGAGTACATGCTTGATGTGGATTACCATATGTGGAGTCTAAGGAGAAGCAAAGCAAACTTCCATCGCATAATGTCGCTACTCTCGGGTTTTACAGCTGTGTGTAAATGGCTTAATGACATTTGCACTTGGAGAAACCCAATTACAACTTGTCTTGTTCATGTCTTGTTAATTATACTTGTTTGCTACCCTGAGTTGATGTTGCCAACCATTTTTCTTTACTTGTTTGTGATTGGTATTTGGAATTACCGGTTCCGACCAAGGAATCCACCTCACATGGATGCTAGGCTTTCACAAGCAGAAGTTTGTCATCCAGATGAATTGGATGAGGAATTTGACACTTTTCCAACTACAAGACCTTCAGATATTGTGAGAATGAGGTATGACAGATTGAGAAGTGTTGCAGGTAGAGTACAAACTGTGGTTGGAGATTTAGCTACTCAAGGAGAAAGAGCTCAAGCTCTACTAAGTTGGAGAGACTCAAGAGCTACAGCTATTTTCATCATCTTCTCGCTGATCTGGGCTGTATTCATTTACATTACTCCATTCCAAGTAATAGCAATTATAGTTGGACTCTTCATGCTTCGTCATCCTCGGTTTCGGAGCAAGATGCCATCAGTACCAGTTAATTTCTTCAAGAGACTGCCTTCGAAATCAGATGCAATGTTTTGA 3105 0.3942 MMNKLVVEVHDASDLMPKDGTGSSNPFVQITFDEQEVKTQTKYKDLNPYFNEKFVFNINTSRDLAHKTVEVSVYNHNEEKPSSKKNFLGRVRISGNSIPLSESESIIKRYPLEHSKGDIALKMIAFHDPFANTPPSPKPHPPPQHSQTKSSSFFEEHDSDHDDEIPLQEINTNINMEDEEMFSDSEKKKKNKKKKEKEVRTFHSIGTEKPSHGHGHGHAPASAFPPVHQAPKFQSFVQPETQTRVDFAKSGPPNVMLMQIPKQNPEYALTETAPPLAARLRYKGGNKVSTTYDLVEQMHFLYVNVVKAKELPVMDISGSLDPYVEVKLGNYKGVTKHLEKNQHPVWKQIFAFSKDRLQSNLLEVTVKDKDLISKDDFVGRIMFDLNEVPVRVPPDSPLAPQWYRLEDKKGMKIEDGEIMLAVWMGTQADESFPEAWHSDAHNVSHSNLSNTRSKVYFTPKLYYLRVEVIEAQDLVPHDKGRVPQASVRVQLGNQMRFTGPSQMRGINPIWNEELMFVAAEPFEDFIIVTVEDKFGPTNVEILGREIMSVRNVPQRMETGKLPDSRWFNLHRPSAVGEEETERKKEKFSSKIHLRICLEAGYHVLDESTHFSSDLQPSSKHLRKKNIGYLEVGILSARNLLPMKGKDGRTTDAYCVAKYGNKWVRTRTLLDTLSPRWNEQYTWEVHDPCTVITVGVFDNHHLNGSSDHKDQRIGKVRIRLSTLETDRVYTHFYPLLVLQPNGLKKNGELHLAVRFTCTAWVNMVAQYSRPLLPKMHYVQPIPVRHIDWLRYQAMQIVAARLARAEPPLRRESVEYMLDVDYHMWSLRRSKANFHRIMSLLSGFTAVCKWLNDICTWRNPITTCLVHVLLIILVCYPELMLPTIFLYLFVIGIWNYRFRPRNPPHMDARLSQAEVCHPDELDEEFDTFPTTRPSDIVRMRYDRLRSVAGRVQTVVGDLATQGERAQALLSWRDSRATAIFIIFSLIWAVFIYITPFQVIAIIVGLFMLRHPRFRSKMPSVPVNFFKRLPSKSDAMF* 1035
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g1132 1034 Pfam Plant phosphoribosyltransferase C-terminal 879 1034 IPR013583 -
Tpr4g1132 1034 Gene3D C2 domain 445 597 IPR035892 -
Tpr4g1132 1034 Gene3D C2 domain 286 424 IPR035892 -
Tpr4g1132 1034 PANTHER PHOSPHORIBOSYLANTHRANILATE TRANSFERASE ISOFORM 1 2 1033 - -
Tpr4g1132 1034 CDD C2D_MCTP_PRT_plant 629 751 - -
Tpr4g1132 1034 CDD C2C_MCTP_PRT_plant 463 616 - -
Tpr4g1132 1034 ProSiteProfiles C2 domain profile. 610 732 IPR000008 -
Tpr4g1132 1034 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 462 618 IPR035892 -
Tpr4g1132 1034 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 300 440 IPR035892 -
Tpr4g1132 1034 PANTHER BNAA09G30540D PROTEIN 2 1033 - -
Tpr4g1132 1034 CDD C2B_MCTP_PRT_plant 300 426 - -
Tpr4g1132 1034 MobiDBLite consensus disorder prediction 151 167 - -
Tpr4g1132 1034 Gene3D C2 domain 1 125 IPR035892 -
Tpr4g1132 1034 ProSiteProfiles C2 domain profile. 1 114 IPR000008 -
Tpr4g1132 1034 ProSiteProfiles C2 domain profile. 442 567 IPR000008 -
Tpr4g1132 1034 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 627 761 IPR035892 -
Tpr4g1132 1034 SMART C2_3c 463 561 IPR000008 -
Tpr4g1132 1034 SMART C2_3c 628 731 IPR000008 -
Tpr4g1132 1034 SMART C2_3c 300 397 IPR000008 -
Tpr4g1132 1034 SMART C2_3c 4 112 IPR000008 -
Tpr4g1132 1034 Gene3D C2 domain 603 756 IPR035892 -
Tpr4g1132 1034 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 3 117 IPR035892 -
Tpr4g1132 1034 ProSiteProfiles C2 domain profile. 282 403 IPR000008 -
Tpr4g1132 1034 Pfam C2 domain 463 567 IPR000008 -
Tpr4g1132 1034 Pfam C2 domain 627 734 IPR000008 -
Tpr4g1132 1034 Pfam C2 domain 4 110 IPR000008 -
Tpr4g1132 1034 Pfam C2 domain 301 404 IPR000008 -
Tpr4g1132 1034 MobiDBLite consensus disorder prediction 134 200 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g1132 Tpr-Chr4 10796887 10800695 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g1132 2 1034 Lipid Metabolism Gene Families AT1G22610 69.858 0.0 1471
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g1132 - - cam:101494825 1660.58