Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g1129 ATGTCGAAATCGGAAAATTCTGAGTTAACATCAAGCAAGTCCAAAACCATGGGATTAGGATCAAAAGTTCATCCTTCAAACGAACCTCCAGAACTTGATCCTGATTCATACGCTCTCGAGAAGTTCAAACTCTACGAAACCAGAGCGAGGTTTTACCTAATTGGAAGTGATCGGAATAAGAGATTCTTTCGTGTATTGAAAATCGATCGATCGGAGCAGTCTGATCTTAATATCAGTCAAGACCCTGTTTTGTACTCGCAGCAGGAAATTAAGAGCTTGCTTCAGCGAATTGCTGAAGGTAACCGAGCCACCGGCGGCCTCACTTTCGTCGCCAAAGTTTTTGGAATTGCAGGCTGCATCAAGTTTCTCGAGTCTTACTATTTGATTCTCGTTACTAAGCGGAAACAAATTGGTTCTATATGTGGGCATGCAATTTATAGCATCAAGGAGAGCCAATTGATAACAATTCCACATGTGTCAATTCAATCTGATTTAGCTCACTCTAAAACTGAGCTAAGATACAAAAAGCTTTTGTCCAGTGTTGATTTGACCAAGGATTTTTTCTTTAGTTACACTTACCCTATAATGCAAAGTTTGCAAAAGAATGTCTCGTCCAATCAAGAAGGAGGGATGCCATATGATAATATATTTGTCTGGAATGCTTATTTGACACAAGCTATCAGATCGAGATGCAATAACACCATATGGACTATAGCTTTGGTTCATGGCCATTTTAGGCAGGTTCGCCTATCAATCTTCGGGAGGGACTTCAGTGTTTCCTTGATTTCTCGACGCTCTAGACATTTTGCAGGGACACGGGAAGGATTGAAGGAGGAGGAGCAACAGACCAGTTACCTGAAAAGGGGAGTGAATGATCGGGGAAGGGTTGCTAATGATGTTGAGACAGAGCAGATAGTCCTTGATGAAGAAGCTGGCTCCTGCAAGGGAAAAATGAGTTCAGTCATACAAATGCGTGGATCAATACCGCTTTTCTGGTCACAAGAAGCATCAAGATTTAGCCCTAAGCCTGATATAATTCTGCAGAGGTATGATCCAACATACCAGGCAACAAAATTTCATTTTGAAGACCTTGCTACAAGATATGGCAATCCAATTATTGTTCTTAATTTGATTAAGACAGTTGAGAAAAGGCCTCGAGAAATGATGCTGAGGCGTGAATTTGCAAATGCTGTTGGGTATCTGAACCAAATTCTACCAGTAGACAACCATCTTAGGTTTATTCACTGGGACTTTCACAAGTTTGCAAAAACCAAGTCTGCCAATGTTTTGGCAGTTTTAGGAGCTGTAGCAAGTGAAGCACTTGATTTAACAAGTTTTTACTATAGTGGCAAACCCAACATCGTAAAGAGGGCAAACAACAGTAATCGAACAAGCATAGGAAGGGATACTTCGCTGAGAGATCTGACAGCTAGTTCTGGGGATCTTGCAAGGCTTGGAAACAATAGTGAAATGCCAAATTCTATGGCTAATCGAGATAGAGAGACTGACATGAATCATCAGAACAAAAATGATTATTTTAATAGTGATGCACCGCATTTTCAGAGTGGAGTTCTCCGTACCAACTGCATTGACTGCTTGGACCGTACAAATGTCGCTCAGTATGCTTATGGCCTTCAAGCTTTAGGACGCCAGCTCCATGCAATGGGTTTGAATGATGTGCCAAAAGTGGATCCCGACAGTAGTATTGCAGCAGCTCTAATGGATATGTATCAAAGTATGGGAGATGCTCTTGCGCAGCAGTATGGTGGCTCTGCAGCTCACAATACTGTGTTTCCAGAGAGGCAGGGAAAGTGGAAAGCAACAACACAATCAAGAGAGTTTTTAAAATCCATAAAACGATATTACAGCAATGCTTACACAGATGGAGAAAAACAAGATGCAATAAACTTATTTTTAGGTTACTTCCAACCACAGGAAGGAAAACCTGCTCTCTGGGAGCTTGATTCAGATTATTATCTCCATGTATCTGGAATTGGAGATGATCTTATTCCTGAGAAGTTTTCTGAACCAAATCTTAAGCCCTCTGGGAGAGATGGAATGGTCTTCACCCCCGTACCAGCTTGCAGAGATGATTTCTCACGCATAAAGCTGACATCATTTGACAAGTTAATTGAAAAGACCTGTAGTACAATTAAAAATGTAAGACTTTCACGTGAACCTGATCAGAGGCCAGGTGGAGTTTCTGGAAACAGTGGTGTAGCACCTGATGCAGCTGAGATACAGCTTAAAAGCCCAAATTGGCTTTTTGGCCAGAGAAAGTATGAAGAAGGTCCCTCTACTGCAAAAGTTGTTTCTAGTGAAACCGGAATTGGGGGATGTAATGCTAATGACTTTTGCAACTTGAATTGGCTTTCCTCTGACAATGATATGAATGAAGGGGATGTTTTCCAAAGGTACTTTACAATGACCTCAGCAAACGAGGCCAACGGTTGGTATGGAGGTACCCTCCTTGGTGATCAAGATGAAAACAGTGATATATATAAACATTATGCTGAGTTATGTCAGGGACCTGCCTTTGAAATTTTCCAAGATGATCAAGAGAGAGAGCAACACTACGCGGATGCTCTAAGCACGAGTTCGTTTGAAATTCTTAATGAGGCCGATGTTGCAGTAGAGATGGAAGCAGCTCTAAAGGAGTATGACCAGGTTGGTGCTGAGCTTGGGATCATTCCCTCATCTTGTAAATTCTTTGCTGATGATCCAAGTTGGTTGACGAGGTGGTTAGTTGGGGAAGAAAAAGTACCCAGGGTATGA 2775 0.4169 MSKSENSELTSSKSKTMGLGSKVHPSNEPPELDPDSYALEKFKLYETRARFYLIGSDRNKRFFRVLKIDRSEQSDLNISQDPVLYSQQEIKSLLQRIAEGNRATGGLTFVAKVFGIAGCIKFLESYYLILVTKRKQIGSICGHAIYSIKESQLITIPHVSIQSDLAHSKTELRYKKLLSSVDLTKDFFFSYTYPIMQSLQKNVSSNQEGGMPYDNIFVWNAYLTQAIRSRCNNTIWTIALVHGHFRQVRLSIFGRDFSVSLISRRSRHFAGTREGLKEEEQQTSYLKRGVNDRGRVANDVETEQIVLDEEAGSCKGKMSSVIQMRGSIPLFWSQEASRFSPKPDIILQRYDPTYQATKFHFEDLATRYGNPIIVLNLIKTVEKRPREMMLRREFANAVGYLNQILPVDNHLRFIHWDFHKFAKTKSANVLAVLGAVASEALDLTSFYYSGKPNIVKRANNSNRTSIGRDTSLRDLTASSGDLARLGNNSEMPNSMANRDRETDMNHQNKNDYFNSDAPHFQSGVLRTNCIDCLDRTNVAQYAYGLQALGRQLHAMGLNDVPKVDPDSSIAAALMDMYQSMGDALAQQYGGSAAHNTVFPERQGKWKATTQSREFLKSIKRYYSNAYTDGEKQDAINLFLGYFQPQEGKPALWELDSDYYLHVSGIGDDLIPEKFSEPNLKPSGRDGMVFTPVPACRDDFSRIKLTSFDKLIEKTCSTIKNVRLSREPDQRPGGVSGNSGVAPDAAEIQLKSPNWLFGQRKYEEGPSTAKVVSSETGIGGCNANDFCNLNWLSSDNDMNEGDVFQRYFTMTSANEANGWYGGTLLGDQDENSDIYKHYAELCQGPAFEIFQDDQEREQHYADALSTSSFEILNEADVAVEMEAALKEYDQVGAELGIIPSSCKFFADDPSWLTRWLVGEEKVPRV* 925
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g1129 924 ProSiteProfiles Sac phosphatase domain profile. 178 590 IPR002013 GO:0016791
Tpr4g1129 924 PANTHER POLYPHOSPHOINOSITIDE PHOSPHATASE 38 863 IPR043573 GO:0043813|GO:0046856
Tpr4g1129 924 MobiDBLite consensus disorder prediction 1 21 - -
Tpr4g1129 924 MobiDBLite consensus disorder prediction 1 33 - -
Tpr4g1129 924 Pfam SacI homology domain 114 421 IPR002013 GO:0016791
Tpr4g1129 924 MobiDBLite consensus disorder prediction 479 510 - -
Tpr4g1129 924 MobiDBLite consensus disorder prediction 479 495 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g1129 Tpr-Chr4 10770727 10785484 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g1129 1 924 Acyl Lipid Metabolism Gene Families AT1G22620 73.815 0.0 1422
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g1129 K22913 - gmx:100800092 1640.17