Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g1116 ATGGCTTTTTGGGCTGTTGAAATCAAACCTGGAAAGCCTTTTACTCACACATACGATGGTTCCAAAGGACGCCTTCACATTTCAATGGCCACTTTGGGACATGGCACTGCAATTACGAAAAGCACACTGCAATGTAATGTGGGAAACAAAAGCCCTGTTTATCTTTGCTCTCTTTATCCTGGTGCTGGAAACACTGAGTCGTTGCAATTGAATTTGGAGCTTGAGGAAGATTGTAATGTTATTTTCTCTGTCATTGGCCCTCGGAGTATTCATCTCTGCGGTTATTATCTTGCTCGTGGACGCTATAACAATACTCTTGATGAATCGGAATCATATGGAGAAGATATAGCTGATACAGAAAACGAGAAATCTGCTCACAGTGACGAAGATGACTACGATGATAGTTTTATTGATGATGATGGTGATCTAGAAGTTTTCCCACCATCTCCTATTTCCAATGAAGAGGATGCATCTTATGATAGCGGACGGAAAAGTGCGAAAGGCAGCCGAAGAAGGATGAGGAAGAAGTACCAGTTGATAGAGTCGGATGATGATATCGGTCTTGAAGAAAAGAAAATTGTCAATGACAGTGTGCATGTACAATCTCAGGAAATTGATAATGAAGATTGTCTACCAATTTCATCTATTTGCAAGAATAAAGCCTCTGGAAGGATCTTGGATCAGGCAATGGATGAGAATGTTGAAGAAGACGCAGTCGATACTGGCAAAAAAGATAGTGAAGACCCTGAAAATAGTCCTATTGAAACAAAATTGAAAACTGACGATGTTGTTGCTGATAATCAGACTCATAGGGAAGCTGAACCTTCAGATCACTTGGCAGTTCCTTGCACTGTTCCGGATGTTGGGGATATTAAAAAGTCAAAAAAGAAAAAGAAGGGAAAGGAAAAAGAAACCAAGAGTTCTTGTAATGACCATTCCACCGAATCAGATAATGCTGTGCAAGAGAAGGAAAAAATGAACACGGCCCAGGATCTCTTGGATCAGGAAATGACTGATAATGTTGACAGTGAAGCAGTTGATGCTGGAAAAAAAGACAGTGAAGACCCTGAAAATAGTACCATTGAAACAAAATTGAAAATTGATGATGTTGTCGCAGATATTCCGACTCACAGCAGGGAAGCTGAACCTTCAGATCCCTTGGCAGTTCTTTGCACTGTTCCGGATGTTGGGGATATTAAAAAGTCAAAAAAGAAAAAGAAGGGAAAGGAAAAAGAAACCAAGAGTTCTTGTAATGACCATTCCACCAAACTAGATAATGCTGCGCAAGAGGAGGAAAAAATGAACACTGCCCAGGATCTCTTGGATCAGGAAATGGCTGATAATGTTGACAAAGAAGCAGTTGATGCTGGAATAAAAGACGGCGAAGACCCTGAGAATAGTAATATTGAAACAAAATTGAAAACTGACGATGTTGTCACAGATATTCAGACTCACAGCAGGAAAGCTGAAACCGCGGATAAAATACTTCCTTTTTTACAGGTTGGTCAAGGACAGGATGATAAACCAAAGAGAAAAAGGAAGGAACGGTCAAAGGAGGAGACAATTTTTACTGTTGACGATGCTTGTATTAGCAATGTTGATAACCTGCCACAGGGAAATGAAGGCAATAATCAGGACATAGTTAATAGGGATGTTAAGATTTCAGACAGTGTTGCACTGCCTTCCACTGAAACAGATTCTCCAAAGAAAACAAAGAGGAGAAAAAAAGAACAGAAAAACAAAGCTTCACTTCCTGAAGGTGACAATGGAAATAGTGAAGGTATCATTCACGATGAGAAAGCCAACAATGAGACAGCAGAATCCGGTCGTTTGATTCATGAACTTTCTGAAACGAAAGAGCAACATCAGAAGCTAACAATTGAAAACAGTGGGAACAACGGTGCTCAAGACAATCCTGATGGAAATCAATCTGAAGATAAGAAAGTTAAGAAAAAGAAGAAGAAAAGTAAAAGTCAGGGCAGTGAAGCTGTAAATTCTGATTTGCCTGTATCGGTTGAGCCAAGTACTGAGATGATGAAAGAGGATGGAAATAATATGGAGGATACAAAGTCTTCCCAAGTTAGAACATTGTCAAATGGACTAGTTATTCAAGAGCTAGAGACGGGGAAAGAAAATGGGAAAATTGCTGCATTAGGAAAAAAGATCAGCATCAATTACACTGGCAAGTTGAAGGAAAATGGTGCGGAGGTTGAGTCAAATGCTGGCCAAGCCCCTTTCAAATTTCGCCTTGGTAAAGGAGAAGTTATTGAGGGTTTGGATATTGGCCTTGAAGGCATGCGAGTTGGAGAAAAGAGAAGACTCGTAATTCCACCATCAATGACGTCTAAGAAGAATGGTGACAGTGAAAACATACCGCCGAATTCATGGTTGATTTATGAATTGGAACTTGTAAAAGTTCATTGA 2424 0.3993 MAFWAVEIKPGKPFTHTYDGSKGRLHISMATLGHGTAITKSTLQCNVGNKSPVYLCSLYPGAGNTESLQLNLELEEDCNVIFSVIGPRSIHLCGYYLARGRYNNTLDESESYGEDIADTENEKSAHSDEDDYDDSFIDDDGDLEVFPPSPISNEEDASYDSGRKSAKGSRRRMRKKYQLIESDDDIGLEEKKIVNDSVHVQSQEIDNEDCLPISSICKNKASGRILDQAMDENVEEDAVDTGKKDSEDPENSPIETKLKTDDVVADNQTHREAEPSDHLAVPCTVPDVGDIKKSKKKKKGKEKETKSSCNDHSTESDNAVQEKEKMNTAQDLLDQEMTDNVDSEAVDAGKKDSEDPENSTIETKLKIDDVVADIPTHSREAEPSDPLAVLCTVPDVGDIKKSKKKKKGKEKETKSSCNDHSTKLDNAAQEEEKMNTAQDLLDQEMADNVDKEAVDAGIKDGEDPENSNIETKLKTDDVVTDIQTHSRKAETADKILPFLQVGQGQDDKPKRKRKERSKEETIFTVDDACISNVDNLPQGNEGNNQDIVNRDVKISDSVALPSTETDSPKKTKRRKKEQKNKASLPEGDNGNSEGIIHDEKANNETAESGRLIHELSETKEQHQKLTIENSGNNGAQDNPDGNQSEDKKVKKKKKKSKSQGSEAVNSDLPVSVEPSTEMMKEDGNNMEDTKSSQVRTLSNGLVIQELETGKENGKIAALGKKISINYTGKLKENGAEVESNAGQAPFKFRLGKGEVIEGLDIGLEGMRVGEKRRLVIPPSMTSKKNGDSENIPPNSWLIYELELVKVH* 808
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g1116 807 MobiDBLite consensus disorder prediction 111 131 - -
Tpr4g1116 807 MobiDBLite consensus disorder prediction 625 640 - -
Tpr4g1116 807 MobiDBLite consensus disorder prediction 450 606 - -
Tpr4g1116 807 MobiDBLite consensus disorder prediction 618 675 - -
Tpr4g1116 807 MobiDBLite consensus disorder prediction 148 174 - -
Tpr4g1116 807 MobiDBLite consensus disorder prediction 228 366 - -
Tpr4g1116 807 Pfam Nucleoplasmin-like domain 3 97 IPR041232 -
Tpr4g1116 807 Gene3D Nucleoplasmin core domain 1 100 - -
Tpr4g1116 807 MobiDBLite consensus disorder prediction 236 277 - -
Tpr4g1116 807 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 716 804 IPR001179 GO:0003755
Tpr4g1116 807 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 719 807 IPR001179 GO:0003755
Tpr4g1116 807 Coils Coil 427 447 - -
Tpr4g1116 807 MobiDBLite consensus disorder prediction 303 330 - -
Tpr4g1116 807 MobiDBLite consensus disorder prediction 592 606 - -
Tpr4g1116 807 MobiDBLite consensus disorder prediction 531 565 - -
Tpr4g1116 807 MobiDBLite consensus disorder prediction 505 523 - -
Tpr4g1116 807 MobiDBLite consensus disorder prediction 116 130 - -
Tpr4g1116 807 MobiDBLite consensus disorder prediction 450 492 - -
Tpr4g1116 807 Gene3D - 669 807 IPR046357 GO:0003755
Tpr4g1116 807 PANTHER FKBP-TYPE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKPA 1 266 - -
Tpr4g1116 807 PANTHER FKBP-TYPE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKPA 549 807 - -
Tpr4g1116 807 PANTHER PEPTIDYLPROLYL ISOMERASE 549 807 - -
Tpr4g1116 807 PANTHER PEPTIDYLPROLYL ISOMERASE 1 266 - -
Tpr4g1116 807 MobiDBLite consensus disorder prediction 411 437 - -
Tpr4g1116 807 MobiDBLite consensus disorder prediction 399 437 - -
Tpr4g1116 807 SUPERFAMILY FKBP-like 679 806 - -
Tpr4g1116 807 MobiDBLite consensus disorder prediction 343 366 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g1116 Tpr-Chr4 10670029 10684464 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g1116 719 804 Calmodulin-binding Proteins AT5G48570 37.931 1.78e-12 68.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g1116 K14826 - jre:109006154 420.624