Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g1100 ATGATGGGGGGAAGTTATGTTGAAGATGATTGGGAATTTGCGTCGTCCTCATCGACAGCTAGTGAGGTTCCGATATTATCTAAGGAGGTTCGGACAGTGGTTTTAGTTGGACGTACTGGCAATGGGAAGAGTGCAACTGGTAATAGTATTCTTGGAGATAAGGTCTTTAAGTCAAGGGCTAGCTCGTCCGGTGTTACCGCCTCTTGTGAAATGCAGACAGCTGAGTTGAATAATGGTGGACTGATTGTCAATGTTATTGACACTCCAGGATTATTTGACGTTTCTATTGAATCTGAGTTTATTGGGAAAGAAATAGTCAAGTGCATTGACTTTGCTAAGGACGGTATCCATGCTATCCTTGTAGTGTTATCTGTTAGATCACGATTTAGTGAGGAAGAAGAAAATGCTCTGCGTAGTTTGCGAACATTATTTGGAAGCAAAATTGTTGACTACATGATTGTGGTCTTCACGGGAGGAGATGATTTAGAAGATAATGACGAGACACTGGACGATTATTTGGGCCGTGAATGTCCAGAGACTTTAAAGGAATTCCTTACTTTGTGTGGGAATCGTTGTGTTCTCTTTGACAACAAGACAAAGGATGAAAAGAAGCAATCTGAACAAGTTCAACGACTTCTCTCTTTTGTAAACACGGTAGTATCAAACAATGATGGGCGTCCTTATACAGATGAGTTATTTACTGAATTAAAGAAAGGAGCAATGAAACTGCACCGTGATCAAAGGAAGGTTGATTCCATGGAAGGATACTCAGAAGCACAAATATCAGGGTTTAAAAAGCTTATGCAACAATCATATGATGACCAGCTAAAACAAATTACTGAGATGATTGAGTCAAAGTTGAAGGAGGCAACTACAAGGCTTGAGAAACAATTGGCAGAAGAGCACATTGCAAGACTAAAAGCAGAAGCTGGTGCAAAGATAGCTCAAAAGAAATCAGACGAAGAAATACGAAAACTAAGAGAGCATCTTGATAAGGCTCATGAAGAACTCCGCAACCGAGGTGGCGGCGGATGTACCATTCTGTGA 1047 0.4078 MMGGSYVEDDWEFASSSSTASEVPILSKEVRTVVLVGRTGNGKSATGNSILGDKVFKSRASSSGVTASCEMQTAELNNGGLIVNVIDTPGLFDVSIESEFIGKEIVKCIDFAKDGIHAILVVLSVRSRFSEEEENALRSLRTLFGSKIVDYMIVVFTGGDDLEDNDETLDDYLGRECPETLKEFLTLCGNRCVLFDNKTKDEKKQSEQVQRLLSFVNTVVSNNDGRPYTDELFTELKKGAMKLHRDQRKVDSMEGYSEAQISGFKKLMQQSYDDQLKQITEMIESKLKEATTRLEKQLAEEHIARLKAEAGAKIAQKKSDEEIRKLREHLDKAHEELRNRGGGGCTIL* 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g1100 348 Coils Coil 280 300 - -
Tpr4g1100 348 Gene3D - 31 247 IPR027417 -
Tpr4g1100 348 PANTHER GTPASE, IMAP FAMILY MEMBER-RELATED 3 338 IPR045058 -
Tpr4g1100 348 PANTHER BNAC06G07830D PROTEIN 3 338 - -
Tpr4g1100 348 SUPERFAMILY C-terminal domain of PLC-beta 199 338 - -
Tpr4g1100 348 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 26 205 IPR027417 -
Tpr4g1100 348 Pfam AIG1 family 31 244 IPR006703 GO:0005525
Tpr4g1100 348 ProSiteProfiles AIG1-type G domain profile. 28 237 IPR006703 GO:0005525
Tpr4g1100 348 Coils Coil 316 336 - -
Tpr4g1100 348 CDD AIG1 31 238 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g1100 Tpr-Chr4 10584780 10588711 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g1100 - - gmx:100801425 503.442
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g1100 4 10584780 10588711 Tpr4g1100 4 10584780 10588711 ECH