Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g1079 ATGGCGGCGATCGAAGAATTATCGGAGCTCGCTGATTCTATGCGTCAAGCTTCTGCGTTACTCGCAGACGAAGATATCGACGAAACTTCCAATTCTAAAAGACCTTCAACTTTCCTCAACGTTGTTGCTCTCGGAAACATGGGTGCTGGTAAATCAGCGGTGTTGAACAGTTTAATTGGACATCCAGTTCTGCCTACTGGTGAAAATGGAGCTACTAGAGCTCCAATTTGCATTGATCTGCAACGGGATACTTCTTTGAGCAGCAAATCTATAATATTGCAGATTGATAATAAAAATCAGCAAGTTTCAGCGAGTGCTTTAAGACATTCCTTGCAGGATAGGTTGAGTAAGGCTACCTCATCCAAGGCTCGTGATCAAATAACTTTGAAGCTACGCACGAGTACAGCTCCACCTCTGAAGTTGGTTGATTTACCCGGGTTGGATTCGCGCACCATAGATGGATCAACAGTTAGTGATTATGCGGAGCACAATGATGCCATCTTGGTTGTTATTGTACCTGCAGCTCAAGCACCTGACATTGCTTCCTCTCGAGCCCTAAGAATAGCAAAGGAATACGATGCAGAAGGTACCAGAACTGTTGGTGTTATCAGTAAAATAGATCAAGCTGCATCAGACCAAAAAGCAATAGCTGCAGTTCAAGCACTTCTACAGAATAAGGGACCTGCTAGAGCATCAGATATCCCTTGGGTTGCATTAATCGGTCAATCAGTTTCAATAGCTACGGCACAGTCTGGATCTGCTGGATCTGAAAATTCTTTAGAAACTGCATGGAAAGCAGAGAGCGAAAGTCTCAAGTCCATACTGACAGGAGCTCCTCAAAGCAAGCTTGGAAGGATAGCTTTTGTGGATGCTCTGGCACAGCAGATTCAGAATCGCATGAGGCTGCGGGTGCCTAACCTTCTTTCTGGGTTACAAGGGAAGTCTCAGGTAGTTCAGGATGAATTGGCAAGGCTTGGTGAGTCAATGGTCACCACTGCTGAGGGTACTCGTGCCATAGCCTTGGAACTCTGCCGTGAGTTTGAAGATAAGTTCCTACAGCACATCACCACCGGCGAGGGAACTGGTTGGAAAATTGTTGCCTGCTTTGAGGGGAGATTTCCTGATAGAATGAAGCAACTGCCATTAGATAGGCATTTTGATATCAACAATGTAAAGAGGATTGTGTTAGAAGCTGATGGTTATCAGCCATATCTCATTTCTCCTGAAAAAGGATTAAGATCACTAATCAAAGGTGTTCTAGAGCTTGCGAAAGAGCCATCACGTCTTTGTGTCGAGGAGGTACACCGTGTCCTGATGGATATTGTGTCGGCTGCTGCCAATGCTACACCTGGTTTAGGAAGATACCCACCTTTCAAAAGAGAGCTTGTGGCTCTTGCAACTGCTGCACTAGAAGGGTTTAAGAATGAATCAAAGAAAATGGTGGTTGCATTAGTTGATATGGAGCGTGCTTTTGTGCCACCCCAACACTTCATTCGCTTGGTACAAAGGAGGATGGAAAGGCAACGCCGAGAAGATGAATTGAAGGGCCGATCTTCGAAAAAAGGGCACGAGGCAGAGCAATCTATACTTAACCGGGCCACTAGTCCCCAAACTGGCGGAAGCATGAAATCACTGAAGGAGGATAAGGAGAAGGATAAGGATAAGGACAAATCCGGGCAGGCAGATAAAGAAGGGCAAGAAGGCTCTGGTTTAAAGACTGCTGGTCCTGAAGGAGAAATTACAGCAGGATTTTTGTTAAAGAAAAGTGCAAAAACTAATGGTTGGAGCAGGCGATGGTTTGTGCTAAATGGAAAGACAGGAAAGCTTGGGTACACAAAAAAACAAGAAGAAAGGCATTTTCGTGGTGTTATTACATTAGAGGAATGTAACATTGAAGAGGTTCCAGAAGAAAACGATCCTCCACCAAAGAGCTCAAAGGACAAGAAGTCTAATGGGCCGGATTCTAGCAAAGTCAACCTTGTATTTAAAATTACTAGTAGAGTCCCTTATAAAACTGTTTTGAAAGCACACAGTGCTGTTGTTTTGAAGGCTGAGAGTGCAACTGATAAGACTGAATGGATTAATAAGATAAGTAGTGTTATACAAGCAAAAGGAGGGCAAATAAGGATTTCATCTGAGGGTGGCTCTGGCATGAGGCATAGCCTCTCTGACGGTTCCTTGGATACAATGGCTCGAAGACCTGCTGATCCTGAGGAAGAACTCCGATGGATGTCCCAAGAAGTCCGTGGTTATGTTGAAGCAGTTTTAAACAGTTTAGCTGCTAATGTACCAAAGGCAGTTGTCCTTTGCCAAGTTGAAAAAGCTAAGGAAGACATGCTGAATCAATTATATAGCTCTGTCAGTGGTCATAGCACGGCTAAGATTGAGGAGCTGCTTCTAGAAGATCAAAATGTAAAGCGCAGGAGAGAGCGCTACCAGAAGCAGTCCTCGCTTCTCTCCAAACTGACACGCCAACTGAGTATACATGACAACCGTGCAGCTGCTGCCTCAAATTGGTCAAATGGGACTGCAGAGAGTAGCCCAAGAAGCAGCGGACCAGGTGATGACTGGAGATCTGCCTTTGATGCAGCTAGCAATGGTCCAGTAAGCCGTAGTGGTTCATCGAGATCTGGTTCAAATGGTCATAGTCGAAATAATAGTGATCCTCCACAAAATGGTGACCTATACTCTGGCTCAAACTCTGGCAGCCGTCGTAGTACTCCTAACCGATTACCGCCTGCTCCACCAGGTTCTTCGGGTTACAAATATTAA 2772 0.4495 MAAIEELSELADSMRQASALLADEDIDETSNSKRPSTFLNVVALGNMGAGKSAVLNSLIGHPVLPTGENGATRAPICIDLQRDTSLSSKSIILQIDNKNQQVSASALRHSLQDRLSKATSSKARDQITLKLRTSTAPPLKLVDLPGLDSRTIDGSTVSDYAEHNDAILVVIVPAAQAPDIASSRALRIAKEYDAEGTRTVGVISKIDQAASDQKAIAAVQALLQNKGPARASDIPWVALIGQSVSIATAQSGSAGSENSLETAWKAESESLKSILTGAPQSKLGRIAFVDALAQQIQNRMRLRVPNLLSGLQGKSQVVQDELARLGESMVTTAEGTRAIALELCREFEDKFLQHITTGEGTGWKIVACFEGRFPDRMKQLPLDRHFDINNVKRIVLEADGYQPYLISPEKGLRSLIKGVLELAKEPSRLCVEEVHRVLMDIVSAAANATPGLGRYPPFKRELVALATAALEGFKNESKKMVVALVDMERAFVPPQHFIRLVQRRMERQRREDELKGRSSKKGHEAEQSILNRATSPQTGGSMKSLKEDKEKDKDKDKSGQADKEGQEGSGLKTAGPEGEITAGFLLKKSAKTNGWSRRWFVLNGKTGKLGYTKKQEERHFRGVITLEECNIEEVPEENDPPPKSSKDKKSNGPDSSKVNLVFKITSRVPYKTVLKAHSAVVLKAESATDKTEWINKISSVIQAKGGQIRISSEGGSGMRHSLSDGSLDTMARRPADPEEELRWMSQEVRGYVEAVLNSLAANVPKAVVLCQVEKAKEDMLNQLYSSVSGHSTAKIEELLLEDQNVKRRRERYQKQSSLLSKLTRQLSIHDNRAAAASNWSNGTAESSPRSSGPGDDWRSAFDAASNGPVSRSGSSRSGSNGHSRNNSDPPQNGDLYSGSNSGSRRSTPNRLPPAPPGSSGYKY* 924
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g1079 923 MobiDBLite consensus disorder prediction 503 576 - -
Tpr4g1079 923 Pfam Dynamin family 41 205 IPR045063 -
Tpr4g1079 923 PANTHER DYNAMIN 2 855 IPR022812 -
Tpr4g1079 923 PANTHER DYNAMIN-2A 2 855 - -
Tpr4g1079 923 Pfam Dynamin central region 258 496 IPR000375 -
Tpr4g1079 923 Pfam PH domain 583 701 IPR001849 -
Tpr4g1079 923 MobiDBLite consensus disorder prediction 503 527 - -
Tpr4g1079 923 SUPERFAMILY PH domain-like 579 709 - -
Tpr4g1079 923 MobiDBLite consensus disorder prediction 714 737 - -
Tpr4g1079 923 ProSiteProfiles PH domain profile. 578 702 IPR001849 -
Tpr4g1079 923 MobiDBLite consensus disorder prediction 631 654 - -
Tpr4g1079 923 SMART dynamin_3 4 247 IPR001401 GO:0003924|GO:0005525
Tpr4g1079 923 MobiDBLite consensus disorder prediction 543 563 - -
Tpr4g1079 923 Gene3D Dynamin, middle domain 332 554 - -
Tpr4g1079 923 ProSitePatterns Dynamin-type guanine nucleotide-binding (G) domain signature. 64 73 IPR019762 -
Tpr4g1079 923 MobiDBLite consensus disorder prediction 865 908 - -
Tpr4g1079 923 SMART PH_update 579 704 IPR001849 -
Tpr4g1079 923 MobiDBLite consensus disorder prediction 528 542 - -
Tpr4g1079 923 MobiDBLite consensus disorder prediction 636 653 - -
Tpr4g1079 923 PRINTS Dynamin signature 38 56 IPR022812 -
Tpr4g1079 923 PRINTS Dynamin signature 63 80 IPR022812 -
Tpr4g1079 923 PRINTS Dynamin signature 175 193 IPR022812 -
Tpr4g1079 923 PRINTS Dynamin signature 194 210 IPR022812 -
Tpr4g1079 923 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 35 314 IPR027417 -
Tpr4g1079 923 Coils Coil 795 815 - -
Tpr4g1079 923 MobiDBLite consensus disorder prediction 833 853 - -
Tpr4g1079 923 ProSiteProfiles Dynamin-type guanine nucleotide-binding (G) domain profile. 35 305 IPR030381 GO:0005525
Tpr4g1079 923 Gene3D - 36 320 IPR027417 -
Tpr4g1079 923 MobiDBLite consensus disorder prediction 833 923 - -
Tpr4g1079 923 ProSiteProfiles GED domain profile. 741 834 IPR020850 -
Tpr4g1079 923 Pfam Dynamin GTPase effector domain 739 821 IPR003130 GO:0003924|GO:0005525
Tpr4g1079 923 Gene3D - 569 705 IPR011993 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g1079 Tpr-Chr4 10393603 10407904 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g1079 K01528 - gmx:100798346 1569.67
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g1079 4 10393603 10407904 Tpr4g1079 4 10393603 10407904 ECH