Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g1076 ATGTTCAAGAAGGCGGTGGAAGCTAAGTCTCAACAGAGACTATCCGGTGCCGACAGAAAGAAGCTCAAACGAACCGTTAAACAAAAATTCCCAACAGCTTCTGATTCTGACCTAGACACTTTACTTCCTCCTAAGGCAGAGATAACAGTGGCCAAGTTTCAAACCAGAGTTCATGTGTATGCTGTGGAGGGAGGTTTTCCTGTGTTTTTCGACATTGATGGCCGCGGTTCGGATATTTTCCCAACAGTTTATGCTCTCTGGATGGTGCCTGATTTGCTGCCAGCTTTCATACTCAAGGGCGGCGAGGTTTCCCGGTATGTTATAGGTGGAGCTGACTTGATGTTCCCTGGTATACTTGTGCCTCCTGAAGGTCTTCCATCATTTGCGGCCGGGGAAACATGGGCGGTTAAAGTACCCGAAAATCCTGCTCCTATTGCGGTTGGGAGTACCACAATGAGCAGTGCCGAAGCATTGAAAGCTGGATTGCGTGGAAAGGCATTGAGAATAACTCATTATTATCGTGATTTGCTATGGGAATCGGTTGAAGGCCGTTATGTGCCTAATGCAGGGTTTTTGGAAGATGTTGTGTTTGGCCATCCTTCTTTATTATCGCCACCTTCTCATGATGGTGATTTGACTGAGGCCGCATGTGAGACATCAATTGACCAACAGGACAACACGAAAAGTGATGAAGCGGAGGGATCATCGGATGTAAATGAATTACCATCTGACTCCAGCCATGCATTGACAACACCAAACAATCATGAAATTACGGCAGATGAAATAACTGCTGGTGTGGTTGATTTGAAGTTACCTGATAATGACTCTCCTAATGAACCAAATGACCAACATACTTTATCAACTTCAGATGTAGATTTGCTGTTAGATAAGTGCCTTTTGCAAGCACTGCATACAACATTGAAGGATAATAAAGACCTTCCAATTCCTGGAAGCACTCTATGGTCAAACCATGTATTGCCATGTAGGCCTTCAGGAATAACTTTAGACATCAAGAAGTCGTCTCACAAGAAGCTATCTAAGTGGTTACAAGCAAAAGCTTCCTCTGGCTTGATATCAGTGAAAGAAGATAAGCATAAAAAAGAAGTCGTGCTATTTTCAGTTAACCGAAAACATGCTGATTATTCATCCTTTAAGCCTGAAAAAAGGCCAGTGGAGAAACCTGACCAGTCCAGTGTCCAATCTGTCAATGAAACTCGTTCGTCCAAAACTCTTGAAGTAGCTGAAATCTACAAGCCAAGCGTACATGTCAATCCCATATTTTCATCTGTTGGAGCTGATACAGGGAAACTTTATACTGCTTCTGAAGCCACTGATATTGTCTTCGCATATGTTGAAAAAGAAAATCTTGTGAAACCAACAAATAAATCCCTTGTGATTCTAGATGCAACGTTATGTGATGCACTGTTCAAGGGGGCTATTAAAAAAGGAACTACTTATCCTACTGAAATTCACAAGAAAGATATAGGGCAAACATTTGTGAACCGAATGCAACCTCACCATGTTGTGACAAGAGGGAATGAATCTGTAGTTCGTAAAGGTGCACTTAAAACAATTCAAATAATGACAGAAAGACGGCAAGGCAACAAGAAGGTAACCAAACTATCTGGTATGGAATCATTTCTTATAGATGGTGAAGCATTAGCATCAGAACTTCAGAAGAAATTTGCTTGCAGTACCACTGTTGGAGAACTACCAGGTAAGAAAGGGCAAGAGGTTCTGGTTCAAGGTGGAGTCATTGACGACCTGGGGAGGCATTTGGTGGAACAATATGGAGTTCCAAAGAGATTTATTGAAGTTCTTGATAAAACCAAGAGATGA 1839 0.4214 MFKKAVEAKSQQRLSGADRKKLKRTVKQKFPTASDSDLDTLLPPKAEITVAKFQTRVHVYAVEGGFPVFFDIDGRGSDIFPTVYALWMVPDLLPAFILKGGEVSRYVIGGADLMFPGILVPPEGLPSFAAGETWAVKVPENPAPIAVGSTTMSSAEALKAGLRGKALRITHYYRDLLWESVEGRYVPNAGFLEDVVFGHPSLLSPPSHDGDLTEAACETSIDQQDNTKSDEAEGSSDVNELPSDSSHALTTPNNHEITADEITAGVVDLKLPDNDSPNEPNDQHTLSTSDVDLLLDKCLLQALHTTLKDNKDLPIPGSTLWSNHVLPCRPSGITLDIKKSSHKKLSKWLQAKASSGLISVKEDKHKKEVVLFSVNRKHADYSSFKPEKRPVEKPDQSSVQSVNETRSSKTLEVAEIYKPSVHVNPIFSSVGADTGKLYTASEATDIVFAYVEKENLVKPTNKSLVILDATLCDALFKGAIKKGTTYPTEIHKKDIGQTFVNRMQPHHVVTRGNESVVRKGALKTIQIMTERRQGNKKVTKLSGMESFLIDGEALASELQKKFACSTTVGELPGKKGQEVLVQGGVIDDLGRHLVEQYGVPKRFIEVLDKTKR* 613
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g1076 612 CDD eIF2D_C 525 607 IPR039759 -
Tpr4g1076 612 Gene3D - 521 607 - -
Tpr4g1076 612 SUPERFAMILY eIF1-like 491 608 IPR036877 GO:0003743|GO:0006413
Tpr4g1076 612 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2D 1 612 IPR039757 GO:0001731|GO:0003743
Tpr4g1076 612 Pfam Pre-PUA-like domain 2 90 IPR041366 -
Tpr4g1076 612 SUPERFAMILY SWIB/MDM2 domain 408 509 IPR036885 -
Tpr4g1076 612 MobiDBLite consensus disorder prediction 236 258 - -
Tpr4g1076 612 ProSiteProfiles PUA domain profile. 93 174 - -
Tpr4g1076 612 SUPERFAMILY PUA domain-like 103 179 IPR015947 -
Tpr4g1076 612 ProSiteProfiles Translation initiation factor SUI1 family profile. 525 597 IPR001950 GO:0003743|GO:0006413
Tpr4g1076 612 MobiDBLite consensus disorder prediction 383 404 - -
Tpr4g1076 612 MobiDBLite consensus disorder prediction 219 259 - -
Tpr4g1076 612 MobiDBLite consensus disorder prediction 1 22 - -
Tpr4g1076 612 Gene3D - 1 185 - -
Tpr4g1076 612 Pfam Translation initiation factor SUI1 523 600 IPR001950 GO:0003743|GO:0006413
Tpr4g1076 612 CDD eIF2D_N 9 81 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g1076 K15027 - gmx:100776835 992.645
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g1076 4 10361246 10368950 Tpr4g1076 4 10361246 10368950 ECH