Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g1043 ATGGAGGGCAAAGTAGGGATTTTATTTCTTATTGTGTTAGGTGCTGCTTCGGCTTGTCATGCAAGAGGCCTACCAAACCTTGAATTATACGGAAAATCAGATGCGTGTACAATTTGCGAGGAATATACAACTGAAGTACTTGATTATCTAAAGGATAACAACACTCATGTAGAGATCATTGATTCCCTTCACAATACTTGCCATCATCTTCTTTCTTTTAACCAGCAGTGCTTGAAATTGGTGGATTATTATGTTCCACTTTTCTTCTCCGAAATAGCTCGAATTACTCCCGGAGAACTCTGTGACAAGTTCAACCTTTGTGAGTCTGCAAAGAATTATGCAAGAGTTCGAGGAAATAGCTGCGGCTTTTGCAAAGACACTGTTGCACAATTATTGGTTGAGTTGAATGATCCTGACACTAAGATTGAGATAATGGAGAAACTATTGAAAGCTTGCAATTCTCTGGAGAATCACACAAAAGAGTGCAAGAGGATGGTTTTCGAGTATGGACCTTTGATTATAATCAATGCAGAGAAGTTCCTAAAGACAAATGACATATGCACTACAATACATGCCTGCCCCGCTTCCTCTATTGTTAGCCAGAAAACTACAATCAATGAAGAAATACCAATGCTTTCTGACTCTTAA 648 0.3873 MEGKVGILFLIVLGAASACHARGLPNLELYGKSDACTICEEYTTEVLDYLKDNNTHVEIIDSLHNTCHHLLSFNQQCLKLVDYYVPLFFSEIARITPGELCDKFNLCESAKNYARVRGNSCGFCKDTVAQLLVELNDPDTKIEIMEKLLKACNSLENHTKECKRMVFEYGPLIIINAEKFLKTNDICTTIHACPASSIVSQKTTINEEIPMLSDS* 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g1043 215 Gene3D - 31 108 - -
Tpr4g1043 215 ProSiteProfiles Saposin B type domain profile. 117 197 IPR008139 -
Tpr4g1043 215 SUPERFAMILY Saposin 118 195 IPR011001 -
Tpr4g1043 215 Gene3D - 117 196 - -
Tpr4g1043 215 Pfam Saposin-like type B, region 1 34 70 IPR007856 GO:0006629
Tpr4g1043 215 Pfam Saposin-like type B, region 1 121 155 IPR007856 GO:0006629
Tpr4g1043 215 ProSiteProfiles Saposin B type domain profile. 32 111 IPR008139 -
Tpr4g1043 215 SUPERFAMILY Saposin 34 110 IPR011001 -
Tpr4g1043 215 PANTHER SAPOSIN-RELATED 1 203 - -
Tpr4g1043 215 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 19 - -
Tpr4g1043 215 Pfam Saposin-like type B, region 2 160 193 IPR008138 -
Tpr4g1043 215 Pfam Saposin-like type B, region 2 75 107 IPR008138 -
Tpr4g1043 215 PANTHER SAPOSIN-RELATED 1 203 - -
Tpr4g1043 215 SMART sapb_4 34 107 IPR008139 -
Tpr4g1043 215 SMART sapb_4 119 193 IPR008139 -
Tpr4g1043 215 Coils Coil 212 215 - -
Tpr4g1043 215 PRINTS Saposin signature 36 56 IPR008373 GO:0005764|GO:0006665
Tpr4g1043 215 PRINTS Saposin signature 118 140 IPR008373 GO:0005764|GO:0006665
Tpr4g1043 215 PRINTS Saposin signature 171 194 IPR008373 GO:0005764|GO:0006665
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g1043 Tpr-Chr4 10104641 10107979 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g1043 K12382 - gmx:100527899 286.189
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g1043 4 10104641 10107979 Tpr4g1043 4 10104641 10107979 ECH