Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g1021 ATGGCATCTTCTTCATTAACAATTTCTCCAAGAAAGCTACACTATGATTTATACTCCTATTCATACAAAGAAGATTCAAACACACCATTAGTGATAAATGTTCTAGCTTCATTAATTGAAAGGAACATGGCAAGAACACAAAGAATTGTGAAAAATTGTTCTAAGAATTTATCCAAAGCAATTACCACAAAAATATTTGATTGTAGAGAGATTCCTGATTTGACCATTCAATCTTATTTAGAGAGAATTTTTAGATACACACGTGCTGGACCTTCGGTTTATGTTGTAGCTTATGTTTATATTGATCGGTTTTGTCAAAATAATGTTGGGTTTAGAATCAATTCAAGAAATGTTCATAGACTTCTCATAACAACCATTATGGTTGCTTCTAAGTATGTTGAAGATATGAATTTCAGAAATTCATACTTTGCAAAAGTTGGTGGTTTAACAACGAGTGAATTGAATGAGTTGGAGCTTGAATTTCTTTTCATGATGAATTTTAAATTACATGTTAATGTGAGTGTATTTGAGAGCTATTGTTGCCATTTGGAGAGAGAAGTAAGCATTGGAGGAGGGTACCATATTGAAAGGACCTTAAGGTGTGCTGAAGAAATCAAAGAAAATGGTTACACACAAATTGCACGTGTAATGTTGTAG 657 0.3227 MASSSLTISPRKLHYDLYSYSYKEDSNTPLVINVLASLIERNMARTQRIVKNCSKNLSKAITTKIFDCREIPDLTIQSYLERIFRYTRAGPSVYVVAYVYIDRFCQNNVGFRINSRNVHRLLITTIMVASKYVEDMNFRNSYFAKVGGLTTSELNELELEFLFMMNFKLHVNVSVFESYCCHLEREVSIGGGYHIERTLRCAEEIKENGYTQIARVML* 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g1021 218 SUPERFAMILY Cyclin-like 79 170 IPR036915 -
Tpr4g1021 218 PIRSF PREG 5 216 IPR012389 -
Tpr4g1021 218 PANTHER CYCLIN-U2-1 1 213 - -
Tpr4g1021 218 Pfam Cyclin 55 169 IPR013922 GO:0000079|GO:0019901
Tpr4g1021 218 PANTHER UNCHARACTERIZED 1 213 IPR013922 GO:0000079|GO:0019901
Tpr4g1021 218 Gene3D - 19 212 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g1021 Tpr-Chr4 9840347 9841991 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g1021 - - lja:Lj0g3v0114179.1 379.407