Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g1016 ATGGATTATTCAGGCTACAACCCTAACCAACCTCAACCTCAACAACAACAATCGTATTACGAATACGATCCATCTCAGATTCAACTTCAACCCTACGATCAATCTTATGCTACTGCTGCTGCAGCATATCAATCTTCATATTACGCTGCTTATAATCAAACATATGCTTCTTATTATCCAACTGATTCAACAACATCACAGCTTCAACAACAACAACAACCGATTAATTATTATCAACAATCTGAACCCGCTCCGGTTCATCCTCCTGGTGTTAACCCTGAACCGGTTCAGCTTAATAATATTCCGATCGGGTCATCATCTCAATACAGAGGTGGGGGTGGTAGATCATTCAGGCGGGGTGGTCGTGGTCGAGGTCAGTTCAATCGTGGAAGAGGACGTGGAGTGGGTAGTGGGAGACACTTTCCGTCTCATTCTTCTGGTGTTGCTATTTCTGATGTACCTGGTGCGTCTGCTGGAGCCACTTATGCAGTACCAGGTTCATCATCAGTCTCAGCTCAAGTGCAAACTGCACCAGTGCAAGCGCCACCACATGGGGTATTTTGTGAAATTTGTAAGATTGAGTGCAATACCTCAGAAGTCATGCAGGTGCATCTGAAAGGAAAAAAGCATCTGAAGAATATAAGATTACATGAAGCAAAACAGAGACACGGTGCTATCAACGGATCAGAGAGTAGTCAGATTCCTACCTCTCAATTGAACTCAACAGAGCAACCTATGATAGCTCAGGAGTCTGAGAACCCCACCAAAAACATGAGCTCTGAAATTGCAGCTGATAATAACAATGTAGGAGAGACTTCTGATGTTCAAGCTGAAGAGCCTGATGGGTTAAGTATAGAAAACTCTGGTGCAAGAGGCCGTGGATTGAAGCGTAAGTTAAGAGGAGGAAAAGGACGTAAACAGGCGAGGACTGCTGATGGTTCAAATCCTGAACAAGCTGTAGCTATTACATGTGAGTTGTGCAATGTTAAATGTGACACCCAACGCGTATACCAGGCTCATATTAGTGGGAAAAAGCACATGAAGCGTGCCTATGGTCCCCAAGCAGTAGGTAACCAAGCTTTGGCCAGAGTAGGTCCCCAAGCTTCGTCTGAAGTAGGTTCCCAAGCTTTGGCTGGAGTTGTAGGGCTTCAAACACTTTACCCACCTGACATCAATGCTCTAGCCAATGCAATTAATGCTCAAGTCCAACAAGGTGATAATGATCCACAGGTACTTCTGGCTCAGCTCCTGGTGAATGCACTATCTCAAGCACAAGGATCAACAGCAGCACCCGTGAATGGCTCCTTGGCTGCTCAGACACCAACACCCATAGCTGGGGCCGGTTCAGGTTATGATCCCCAGTTGGTGCAGACTCAAGTCTCGGAAGTCACAGCGCATGCTGGGGTGGGAAATCTTCCTGAAGAATCAAAAAATGAGATTTTATCTGTTCCACTGGAATCAAATGCACATGAAGGTTCAAATGTTGGCACCCAAAATGAAGGTGGAAGTTCGGAAACTAAATAG 1524 0.4534 MDYSGYNPNQPQPQQQQSYYEYDPSQIQLQPYDQSYATAAAAYQSSYYAAYNQTYASYYPTDSTTSQLQQQQQPINYYQQSEPAPVHPPGVNPEPVQLNNIPIGSSSQYRGGGGRSFRRGGRGRGQFNRGRGRGVGSGRHFPSHSSGVAISDVPGASAGATYAVPGSSSVSAQVQTAPVQAPPHGVFCEICKIECNTSEVMQVHLKGKKHLKNIRLHEAKQRHGAINGSESSQIPTSQLNSTEQPMIAQESENPTKNMSSEIAADNNNVGETSDVQAEEPDGLSIENSGARGRGLKRKLRGGKGRKQARTADGSNPEQAVAITCELCNVKCDTQRVYQAHISGKKHMKRAYGPQAVGNQALARVGPQASSEVGSQALAGVVGLQTLYPPDINALANAINAQVQQGDNDPQVLLAQLLVNALSQAQGSTAAPVNGSLAAQTPTPIAGAGSGYDPQLVQTQVSEVTAHAGVGNLPEESKNEILSVPLESNAHEGSNVGTQNEGGSSETK* 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g1016 507 SUPERFAMILY beta-beta-alpha zinc fingers 177 222 IPR036236 -
Tpr4g1016 507 MobiDBLite consensus disorder prediction 102 146 - -
Tpr4g1016 507 PANTHER OS06G0651300 PROTEIN-RELATED 100 471 - -
Tpr4g1016 507 PANTHER OS06G0651300 PROTEIN-RELATED 1 93 - -
Tpr4g1016 507 MobiDBLite consensus disorder prediction 220 257 - -
Tpr4g1016 507 MobiDBLite consensus disorder prediction 481 507 - -
Tpr4g1016 507 SUPERFAMILY beta-beta-alpha zinc fingers 321 349 IPR036236 -
Tpr4g1016 507 SMART c2h2final6 186 210 IPR013087 -
Tpr4g1016 507 SMART c2h2final6 322 346 IPR013087 -
Tpr4g1016 507 PANTHER GLUTENIN, HIGH MOLECULAR WEIGHT SUBUNIT 12-LIKE 100 471 - -
Tpr4g1016 507 PANTHER GLUTENIN, HIGH MOLECULAR WEIGHT SUBUNIT 12-LIKE 1 93 - -
Tpr4g1016 507 SMART ZnF_U1_5 319 354 IPR003604 GO:0003676|GO:0008270
Tpr4g1016 507 SMART ZnF_U1_5 183 217 IPR003604 GO:0003676|GO:0008270
Tpr4g1016 507 MobiDBLite consensus disorder prediction 225 257 - -
Tpr4g1016 507 Gene3D Classic Zinc Finger 303 351 - -
Tpr4g1016 507 Gene3D Classic Zinc Finger 171 219 - -
Tpr4g1016 507 MobiDBLite consensus disorder prediction 467 507 - -
Tpr4g1016 507 Pfam Zinc-finger of C2H2 type 323 346 - -
Tpr4g1016 507 MobiDBLite consensus disorder prediction 271 316 - -
Tpr4g1016 507 MobiDBLite consensus disorder prediction 1 22 - -
Tpr4g1016 507 Pfam Zinc-finger double-stranded RNA-binding 187 210 IPR022755 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g1016 - - vra:106780092 357.451